RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-205ENST00000486360 TUSC1Q2TAM9 212 aa13.18□□□□□ -0.3
PPFIA4-205ENST00000486360 OR4P4Q8NGL7 312 aa13.18□□□□□ -0.3
PPFIA4-205ENST00000486360 LSM10Q969L4 123 aaKnown RBP13.18□□□□□ -0.3
PPFIA4-205ENST00000486360 B9A039 149 aa13.18□□□□□ -0.3
PPFIA4-205ENST00000486360 C11orf94C9JXX5 98 aa13.18□□□□□ -0.3
PPFIA4-205ENST00000486360 S1PR2O95136 353 aa13.18□□□□□ -0.3
PPFIA4-205ENST00000486360 CCDC144NLQ6NUI1 221 aa13.18□□□□□ -0.3
PPFIA4-205ENST00000486360 ZNF439Q8NDP4 499 aa13.18□□□□□ -0.3
PPFIA4-205ENST00000486360 PCGF1Q9BSM1 259 aa13.18□□□□□ -0.3
PPFIA4-205ENST00000486360 LPAR2Q9HBW0 351 aa13.18□□□□□ -0.3
PPFIA4-205ENST00000486360 PNRC2Q9NPJ4 139 aaKnown RBP13.18□□□□□ -0.3
PPFIA4-205ENST00000486360 ZNF785A8K8V0 405 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 CHEK1O14757 476 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 ZCCHC14Q8WYQ9 949 aaKnown RBP13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 ZDHHC11Q9H8X9 412 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 MMP7P09237 267 aaPredicted RBP13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 PGA5P0DJD9 388 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 HIST3H3Q16695 136 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 BSXQ3C1V8 233 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 MYPOPQ86VE0 399 aaPredicted RBP13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 BLNKQ8WV28 456 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 AP1S3Q96PC3 154 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 MS4A7Q9GZW8 240 aaPredicted RBP13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 NPVFQ9HCQ7 196 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 IGHV3-72A0A0B4J1Y9 119 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 IGHV1-69-2A0A0G2JMI3 117 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 GNG4P50150 75 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 DHRS11Q6UWP2 260 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 RSRP1Q9BUV0 290 aa13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 BARX1Q9HBU1 254 aaPredicted RBP13.17□□□□□ -0.3
PPFIA4-205ENST00000486360 PLXNB3Q9ULL4 1909 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 A0A0A6YYD4 124 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 APELAP0DMC3 54 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 TNFRSF9Q07011 255 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 PSG5Q15238 335 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 OR1B1Q8NGR6 318 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 TUBD1Q9UJT1 453 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 ETV2O00321 342 aaPredicted RBP13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 TMEM30BQ3MIR4 351 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 DPPA3Q6W0C5 159 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 H1FOOQ8IZA3 346 aaPredicted RBP13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 TMEM140Q9NV12 185 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 FER1L5A0AVI2 2057 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 XKRY2A2RUG3 117 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 C7orf77A4D0Y5 90 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 NHLRC3Q5JS37 347 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 PEAR1Q5VY43 1037 aaPredicted RBP13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 SPACA3Q8IXA5 215 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 NAT8Q9UHE5 227 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 C20orf202A1L168 122 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 GNG7O60262 68 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 PAGE4O60829 102 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 UCP1P25874 307 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 APOBEC3AP31941 199 aaPredicted RBP13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 FAM201AQ5SY85 155 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 FAM166AQ6J272 317 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 RASL11BQ9BPW5 248 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 NRIP2Q9BQI9 281 aa13.16□□□□□ -0.3
PPFIA4-205ENST00000486360 KIF26AQ9ULI4 1882 aaPredicted RBP13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 RPL27AP46776 148 aaKnown RBP13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 BSPH1Q075Z2 132 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 FOXF2Q12947 444 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 CBLN2Q8IUK8 224 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 MRPL30Q8TCC3 161 aaKnown RBP13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 NIT2Q9NQR4 276 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 ATXN7O15265 892 aaPredicted RBP13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 CLN5O75503 358 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 ARG1P05089 322 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 ZNF735P0CB33 412 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 LAMTOR1Q6IAA8 161 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 OR4C12Q96R67 309 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 TMUB1Q9BVT8 246 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 WASHC3Q9Y3C0 194 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 C2orf16Q68DN1 1984 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 IGKV1-12A0A0C4DH73 117 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 C5orf63A6NC05 138 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 IGKV1D-12P01611 117 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 GALR1P47211 349 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 LGALS7P47929 136 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 RPL8P62917 257 aaKnown RBP13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 KHDC3LQ587J8 217 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 FAM209AQ5JX71 171 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 CACNA1BQ00975 2339 aa13.15□□□□□ -0.3
PPFIA4-205ENST00000486360 LDLRAD4O15165 306 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 SPP1P10451 314 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 CTRB1P17538 263 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 WNT5AP41221 380 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 RND3P61587 244 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 SRSF6Q13247 344 aaKnown RBP13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 CTRB2Q6GPI1 263 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 OR4X1Q8NH49 305 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 OR13A1Q8NGR1 328 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 TAF15Q92804 592 aaKnown RBP eCLIP13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 ZNF524Q96C55 264 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 COA4Q9NYJ1 87 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 PROB1E7EW31 1015 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 MPDU1O75352 247 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 WISP1O95388 367 aa13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 HSPE1P61604 102 aaKnown RBP13.14□□□□□ -0.31
PPFIA4-205ENST00000486360 FAM210BQ96KR6 192 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms