RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 IGLV1-47P01700 117 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 CT45A6P0DMU7 189 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 CT45A5P0DMU8 189 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 CT45A7P0DMV0 189 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 REG1BP48304 166 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 KLRD1Q13241 179 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 IAH1Q2TAA2 248 aaPredicted RBP11.74□□□□□ -0.53
COL9A1-207ENST00000486080 VMO1Q7Z5L0 202 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 NOXA1Q86UR1 476 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 ZNF383Q8NA42 475 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 C2orf50Q96LR7 162 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 GSKIPQ9P0R6 139 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 FCGR3BO75015 233 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 S1PR2O95136 353 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 RPA2P15927 270 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 PRTN3P24158 256 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 GZMKP49863 264 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 LRRC37A5PQ49AS3 106 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 HCP5Q6MZN7 132 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 C1orf122Q6ZSJ8 110 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 PDZD9Q8IXQ8 264 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 KIR3DL3Q8N743 410 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 DDB2Q92466 427 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 IL22RA2Q969J5 263 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 ST6GALNAC6Q969X2 333 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 NMES1Q9C002 83 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 SIRPDQ9H106 197 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 POLR3KQ9Y2Y1 108 aaPredicted RBP11.73□□□□□ -0.53
COL9A1-207ENST00000486080 TMED3Q9Y3Q3 217 aa11.73□□□□□ -0.53
COL9A1-207ENST00000486080 PDZD2O15018 2839 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 A0A096LNT2 108 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 TRAV14DV4A0A0A6YYC5 116 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 A0A0G2JRQ6 117 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 IGKV1-5P01602 117 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 SLC25A16P16260 332 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 USF1P22415 310 aaPredicted RBP11.72□□□□□ -0.53
COL9A1-207ENST00000486080 PRRX1P54821 245 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 IZUMO4Q1ZYL8 232 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 HLA-DRB5Q30154 266 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 NMSQ5H8A3 153 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 LRRC75A-AS1Q8N1F1 130 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 OR13D1Q8NGV5 346 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 PPP1R1CQ8WVI7 109 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 ASB13Q8WXK3 278 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 TNFRSF14Q92956 283 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 MRPL20Q9BYC9 149 aaKnown RBP11.72□□□□□ -0.53
COL9A1-207ENST00000486080 RANBP3Q9H6Z4 567 aaPredicted RBP11.72□□□□□ -0.53
COL9A1-207ENST00000486080 KPTNQ9Y664 436 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 VDAC1P21796 283 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 THBS3P49746 956 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 DVL1P1P54792 670 aaPredicted RBP11.72□□□□□ -0.53
COL9A1-207ENST00000486080 IL15RAQ13261 267 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 Q5PR19 223 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 TCTEX1D1Q8N7M0 179 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 OR4P4Q8NGL7 312 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 GRPEL2Q8TAA5 225 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 MBD6Q96DN6 1003 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 PCGF1Q9BSM1 259 aa11.72□□□□□ -0.53
COL9A1-207ENST00000486080 DUXBA0A1W2PPF3 345 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 BUB1B-PAK6H3BSN5 160 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 KRASP01116 189 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 MMP9P14780 707 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 EPHA1P21709 976 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 G6PCP35575 357 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 ZNF137PP52743 207 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 LDLRAD2Q5SZI1 272 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 ZBTB8BQ8NAP8 495 aaPredicted RBP11.71□□□□□ -0.54
COL9A1-207ENST00000486080 BEND2Q8NDZ0 799 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 OR11H6Q8NGC7 330 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 TMEM186Q96B77 213 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 GPR146Q96CH1 333 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 UNKLQ9H9P5 680 aaKnown RBP11.71□□□□□ -0.54
COL9A1-207ENST00000486080 PRELID3BQ9Y3B1 194 aa11.71□□□□□ -0.54
COL9A1-207ENST00000486080 A0A1W2PRD5 423 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 A0A1W2PRF3 423 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 A0A1W2PRM7 423 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 RNASEK-C17orf49H0YIS7 233 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 TOX4O94842 621 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 ARG1P05089 322 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 HOXB4P17483 251 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-207ENST00000486080 AKR1C2P52895 323 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 CYCSP99999 105 aaKnown RBP11.7□□□□□ -0.54
COL9A1-207ENST00000486080 Q6ZRM9 215 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 KRTAP1-3Q8IUG1 177 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 MAPK1IP1LQ8NDC0 245 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 CD300LFQ8TDQ1 290 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 ADTRPQ96IZ2 230 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 TBX15Q96SF7 602 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 HEXA-AS1Q9H8Q6 139 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 FAM212BQ9NTI7 297 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-207ENST00000486080 INSIG2Q9Y5U4 225 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 CR1P17927 2039 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 IL3RAP26951 378 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 PSMB6P28072 239 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 RAB32Q13637 225 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 RNASE11Q8TAA1 199 aaKnown RBP11.7□□□□□ -0.54
COL9A1-207ENST00000486080 HYLS1Q96M11 299 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 NABP2Q9BQ15 211 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 COMMD9Q9P000 198 aa11.7□□□□□ -0.54
COL9A1-207ENST00000486080 SVEP1Q4LDE5 3571 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms