RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 RCC1LQ96I51 464 aaKnown RBP15.27■□□□□ 0.04
SNX5-213ENST00000486039 RAX2Q96IS3 184 aa15.27■□□□□ 0.04
SNX5-213ENST00000486039 DCSTAMPQ9H295 470 aa15.27■□□□□ 0.04
SNX5-213ENST00000486039 KLK15Q9H2R5 256 aa15.27■□□□□ 0.04
SNX5-213ENST00000486039 AURKAIP1Q9NWT8 199 aaPredicted RBP15.27■□□□□ 0.04
SNX5-213ENST00000486039 ETV7Q9Y603 341 aa15.27■□□□□ 0.04
SNX5-213ENST00000486039 TRAV41A0A0B4J266 112 aa15.26■□□□□ 0.03
SNX5-213ENST00000486039 IGLV1-40P01703 118 aa15.26■□□□□ 0.03
SNX5-213ENST00000486039 APOA2P02652 100 aa15.26■□□□□ 0.03
SNX5-213ENST00000486039 GNG2P59768 71 aa15.26■□□□□ 0.03
SNX5-213ENST00000486039 RPS16P62249 146 aaKnown RBP15.26■□□□□ 0.03
SNX5-213ENST00000486039 PITPNAQ00169 270 aa15.26■□□□□ 0.03
SNX5-213ENST00000486039 KIAA0141Q14154 515 aaPredicted RBP15.26■□□□□ 0.03
SNX5-213ENST00000486039 PLGLAQ15195 96 aa15.26■□□□□ 0.03
SNX5-213ENST00000486039 TIMM50Q3ZCQ8 353 aa15.26■□□□□ 0.03
SNX5-213ENST00000486039 MYOZ3Q8TDC0 251 aa15.26■□□□□ 0.03
SNX5-213ENST00000486039 SLC35D1Q9NTN3 355 aa15.26■□□□□ 0.03
SNX5-213ENST00000486039 METTL1Q9UBP6 276 aaKnown RBP15.26■□□□□ 0.03
SNX5-213ENST00000486039 AIREO43918 545 aa15.25■□□□□ 0.03
SNX5-213ENST00000486039 EGR2P11161 476 aaPredicted RBP15.25■□□□□ 0.03
SNX5-213ENST00000486039 CRIP2P52943 208 aaPredicted RBP15.25■□□□□ 0.03
SNX5-213ENST00000486039 DEFB136Q30KP8 78 aa15.25■□□□□ 0.03
SNX5-213ENST00000486039 C19orf54Q5BKX5 351 aa15.25■□□□□ 0.03
SNX5-213ENST00000486039 MINDY2Q8NBR6 621 aa15.25■□□□□ 0.03
SNX5-213ENST00000486039 FLYWCH2Q96CP2 140 aaKnown RBP15.25■□□□□ 0.03
SNX5-213ENST00000486039 CLCC1Q96S66 551 aa15.25■□□□□ 0.03
SNX5-213ENST00000486039 TSNAXQ99598 290 aaKnown RBP15.25■□□□□ 0.03
SNX5-213ENST00000486039 VCX3AQ9NNX9 186 aa15.25■□□□□ 0.03
SNX5-213ENST00000486039 RBM7Q9Y580 266 aaKnown RBP15.25■□□□□ 0.03
SNX5-213ENST00000486039 TRAV18A0A075B6X5 111 aa15.24■□□□□ 0.03
SNX5-213ENST00000486039 TRIM64CA6NLI5 447 aa15.24■□□□□ 0.03
SNX5-213ENST00000486039 CCL24O00175 119 aa15.24■□□□□ 0.03
SNX5-213ENST00000486039 SPDEFO95238 335 aa15.24■□□□□ 0.03
SNX5-213ENST00000486039 DUS4LO95620 317 aaKnown RBP15.24■□□□□ 0.03
SNX5-213ENST00000486039 RPS19P39019 145 aaKnown RBP15.24■□□□□ 0.03
SNX5-213ENST00000486039 LSM3P62310 102 aaKnown RBP15.24■□□□□ 0.03
SNX5-213ENST00000486039 ECSCRQ19T08 205 aa15.24■□□□□ 0.03
SNX5-213ENST00000486039 TPSG1Q9NRR2 321 aa15.24■□□□□ 0.03
SNX5-213ENST00000486039 SPATA2Q9UM82 520 aa15.24■□□□□ 0.03
SNX5-213ENST00000486039 NUBP2Q9Y5Y2 271 aa15.24■□□□□ 0.03
SNX5-213ENST00000486039 J3QRK9 145 aa15.23■□□□□ 0.03
SNX5-213ENST00000486039 SOX15O60248 233 aa15.23■□□□□ 0.03
SNX5-213ENST00000486039 TMEM127O75204 238 aa15.23■□□□□ 0.03
SNX5-213ENST00000486039 IGLV2-23P01705 113 aa15.23■□□□□ 0.03
SNX5-213ENST00000486039 CTXN2P0C2S0 81 aa15.23■□□□□ 0.03
SNX5-213ENST00000486039 NFYAP23511 347 aaPredicted RBP15.23■□□□□ 0.03
SNX5-213ENST00000486039 CNIH2Q6PI25 160 aa15.23■□□□□ 0.03
SNX5-213ENST00000486039 ZNF562Q6V9R5 426 aa15.23■□□□□ 0.03
SNX5-213ENST00000486039 ZNF491Q8N8L2 437 aa15.23■□□□□ 0.03
SNX5-213ENST00000486039 C4orf3Q8WVX3 66 aa15.23■□□□□ 0.03
SNX5-213ENST00000486039 FAM103A1Q9BTL3 118 aaKnown RBP15.23■□□□□ 0.03
SNX5-213ENST00000486039 ANXA10Q9UJ72 324 aa15.23■□□□□ 0.03
SNX5-213ENST00000486039 A0A0A6YYH2 397 aa15.22■□□□□ 0.03
SNX5-213ENST00000486039 A6NJ64 397 aa15.22■□□□□ 0.03
SNX5-213ENST00000486039 SLC25A17O43808 307 aa15.22■□□□□ 0.03
SNX5-213ENST00000486039 CA2P00918 260 aa15.22■□□□□ 0.03
SNX5-213ENST00000486039 DUTP33316 252 aaKnown RBP15.22■□□□□ 0.03
SNX5-213ENST00000486039 RAB9AP51151 201 aa15.22■□□□□ 0.03
SNX5-213ENST00000486039 BVESQ8NE79 360 aa15.22■□□□□ 0.03
SNX5-213ENST00000486039 DDB2Q92466 427 aa15.22■□□□□ 0.03
SNX5-213ENST00000486039 UBE2E2Q96LR5 201 aa15.22■□□□□ 0.03
SNX5-213ENST00000486039 GNB4Q9HAV0 340 aa15.22■□□□□ 0.03
SNX5-213ENST00000486039 OR2W1Q9Y3N9 320 aa15.22■□□□□ 0.03
SNX5-213ENST00000486039 A3GALT2U3KPV4 340 aa15.22■□□□□ 0.03
SNX5-213ENST00000486039 A0A1W2PN81 502 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 SRRM4A7MD48 611 aaKnown RBP15.21■□□□□ 0.03
SNX5-213ENST00000486039 LINC00473A8K010 186 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 HLA-DQB1P01920 261 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 CRYGBP07316 175 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 CHRNA7P36544 502 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 LGALS7P47929 136 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 KRTAP10-11P60412 298 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 SSBP2P81877 361 aaPredicted RBP15.21■□□□□ 0.03
SNX5-213ENST00000486039 TMEM177Q53S58 311 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 TMEM65Q6PI78 240 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 CROCCP3Q8IVE0 287 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 GVQW1Q8N7I0 195 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 ABHD5Q8WTS1 349 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 AUNIPQ9H7T9 357 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 DIABLOQ9NR28 239 aa15.21■□□□□ 0.03
SNX5-213ENST00000486039 IGKV1D-13A0A0B4J2D9 117 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 ARPC1BO15143 372 aaKnown RBP15.2■□□□□ 0.02
SNX5-213ENST00000486039 IGLV2-14P01704 120 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 IGKV1-13P0DP09 117 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 PTHLHP12272 177 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 HOXD3P31249 432 aaPredicted RBP15.2■□□□□ 0.02
SNX5-213ENST00000486039 LUMP51884 338 aaPredicted RBP15.2■□□□□ 0.02
SNX5-213ENST00000486039 RAB25P57735 213 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 TAGLNQ01995 201 aaKnown RBP15.2■□□□□ 0.02
SNX5-213ENST00000486039 PPP1R27Q86WC6 154 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 ZNF645Q8N7E2 425 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 TCTEX1D1Q8N7M0 179 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 OR11H1Q8NG94 326 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 CASTOR1Q8WTX7 329 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 HARBI1Q96MB7 349 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 FOXA2Q9Y261 457 aaPredicted RBP15.2■□□□□ 0.02
SNX5-213ENST00000486039 VSIG4Q9Y279 399 aa15.2■□□□□ 0.02
SNX5-213ENST00000486039 I3L521 148 aa15.19■□□□□ 0.02
SNX5-213ENST00000486039 RRASP10301 218 aa15.19■□□□□ 0.02
SNX5-213ENST00000486039 EGFEM1PQ0D2K5 195 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms