RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 NDPQ00604 133 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 ARL6IP1Q15041 203 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 DEFB121Q5J5C9 76 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 HACD4Q5VWC8 232 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 OR5H6Q8NGV6 325 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 TSNAXQ99598 290 aaKnown RBP13.79□□□□□ -0.2
COL6A1-204ENST00000486023 CABLES2Q9BTV7 478 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 GAB2Q9UQC2 676 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 SLC25A17O43808 307 aa13.78□□□□□ -0.2
COL6A1-204ENST00000486023 CA2P00918 260 aa13.78□□□□□ -0.2
COL6A1-204ENST00000486023 FCER2P06734 321 aa13.78□□□□□ -0.2
COL6A1-204ENST00000486023 PPIFP30405 207 aaKnown RBP13.78□□□□□ -0.2
COL6A1-204ENST00000486023 TGFBR1P36897 503 aa13.78□□□□□ -0.2
COL6A1-204ENST00000486023 LSM3P62310 102 aaKnown RBP13.78□□□□□ -0.2
COL6A1-204ENST00000486023 ZNF660Q6AZW8 331 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-204ENST00000486023 PPP1R27Q86WC6 154 aa13.78□□□□□ -0.2
COL6A1-204ENST00000486023 BVESQ8NE79 360 aa13.78□□□□□ -0.2
COL6A1-204ENST00000486023 OR11H1Q8NG94 326 aa13.78□□□□□ -0.2
COL6A1-204ENST00000486023 MS4A10Q96PG2 267 aa13.78□□□□□ -0.2
COL6A1-204ENST00000486023 RNF5Q99942 180 aa13.78□□□□□ -0.2
COL6A1-204ENST00000486023 GNB4Q9HAV0 340 aa13.78□□□□□ -0.2
COL6A1-204ENST00000486023 RHBDL2Q9NX52 303 aa13.78□□□□□ -0.2
COL6A1-204ENST00000486023 TRAV18A0A075B6X5 111 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 CNIH1O95406 144 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 NFYAP23511 347 aaPredicted RBP13.77□□□□□ -0.21
COL6A1-204ENST00000486023 RAB9AP51151 201 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 UNQ5815/PRO19632Q6UWF5 114 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 PDPNQ86YL7 162 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 RNF152Q8N8N0 203 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.77□□□□□ -0.21
COL6A1-204ENST00000486023 LFNGQ8NES3 379 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 TSPAN14Q8NG11 270 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 GRPEL2Q8TAA5 225 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 C4orf3Q8WVX3 66 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 MCRIP2Q9BUT9 160 aaKnown RBP13.77□□□□□ -0.21
COL6A1-204ENST00000486023 VCX3AQ9NNX9 186 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 TPSG1Q9NRR2 321 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 VSIG4Q9Y279 399 aa13.77□□□□□ -0.21
COL6A1-204ENST00000486023 SHOXO15266 292 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 SCGNO76038 276 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 DTYMKP23919 212 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 TMEM267Q0VDI3 215 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-204ENST00000486023 CBX3Q13185 183 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 ZNF260Q3ZCT1 412 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 ZNF491Q8N8L2 437 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 OR5M8Q8NGP6 311 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 OR1N2Q8NGR9 330 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 C5orf30Q96GV9 206 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 GPR61Q9BZJ8 451 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 TOLLIPQ9H0E2 274 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 ZNF355PQ9NSJ1 428 aa13.76□□□□□ -0.21
COL6A1-204ENST00000486023 A0A087WXM4 84 aa13.75□□□□□ -0.21
COL6A1-204ENST00000486023 IGLV1-40P01703 118 aa13.75□□□□□ -0.21
COL6A1-204ENST00000486023 PITPNAQ00169 270 aa13.75□□□□□ -0.21
COL6A1-204ENST00000486023 FXYD3Q14802 87 aa13.75□□□□□ -0.21
COL6A1-204ENST00000486023 SRSF7Q16629 238 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL6A1-204ENST00000486023 ACTBL2Q562R1 376 aa13.75□□□□□ -0.21
COL6A1-204ENST00000486023 H1FOOQ8IZA3 346 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-204ENST00000486023 MINDY2Q8NBR6 621 aa13.75□□□□□ -0.21
COL6A1-204ENST00000486023 UBE2E2Q96LR5 201 aa13.75□□□□□ -0.21
COL6A1-204ENST00000486023 HARBI1Q96MB7 349 aa13.75□□□□□ -0.21
COL6A1-204ENST00000486023 DCUN1D5Q9BTE7 237 aa13.75□□□□□ -0.21
COL6A1-204ENST00000486023 ALX4Q9H161 411 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-204ENST00000486023 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL6A1-204ENST00000486023 ZNF580Q9UK33 172 aa13.75□□□□□ -0.21
COL6A1-204ENST00000486023 FOXA2Q9Y261 457 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-204ENST00000486023 WI2-2373I1.2A0A1W2PRP0 233 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 AIREO43918 545 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 SSX5O60225 188 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 SOX15O60248 233 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 TUSC2O75896 110 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 TNFAIP8O95379 198 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 CTXN2P0C2S0 81 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 EGR2P11161 476 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-204ENST00000486023 CD40LGP29965 261 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 LUMP51884 338 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-204ENST00000486023 PJVKQ0ZLH3 352 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 KIAA0141Q14154 515 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-204ENST00000486023 RTL8BQ17RB0 113 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 TIMM50Q3ZCQ8 353 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 ZNF562Q6V9R5 426 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 Q6ZS49 121 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 OR5T1Q8NG75 326 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 ARPC1AQ92747 370 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 DCSTAMPQ9H295 470 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 NUBP2Q9Y5Y2 271 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 ETV7Q9Y603 341 aa13.74□□□□□ -0.21
COL6A1-204ENST00000486023 K7EIL1 84 aa13.73□□□□□ -0.21
COL6A1-204ENST00000486023 IGHV3-11P01762 117 aa13.73□□□□□ -0.21
COL6A1-204ENST00000486023 PTHLHP12272 177 aa13.73□□□□□ -0.21
COL6A1-204ENST00000486023 ARPC4P59998 168 aa13.73□□□□□ -0.21
COL6A1-204ENST00000486023 OR2B11Q5JQS5 317 aa13.73□□□□□ -0.21
COL6A1-204ENST00000486023 CNIH2Q6PI25 160 aa13.73□□□□□ -0.21
COL6A1-204ENST00000486023 GVQW1Q8N7I0 195 aa13.73□□□□□ -0.21
COL6A1-204ENST00000486023 SLC25A38Q96DW6 304 aa13.73□□□□□ -0.21
COL6A1-204ENST00000486023 DIABLOQ9NR28 239 aa13.73□□□□□ -0.21
COL6A1-204ENST00000486023 ANXA10Q9UJ72 324 aa13.73□□□□□ -0.21
COL6A1-204ENST00000486023 DNAH3Q8TD57 4116 aa13.72□□□□□ -0.21
COL6A1-204ENST00000486023 LINC00473A8K010 186 aa13.72□□□□□ -0.21
COL6A1-204ENST00000486023 SEC14L6B5MCN3 397 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms