RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 GSTT2P0CG29 244 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 GSTT2BP0CG30 244 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 CD28P10747 220 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 EGR2P11161 476 aaPredicted RBP4.49□□□□□ -1.69
CUX1-208ENST00000485792 TMEM11P17152 192 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 IL3RAP26951 378 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 CEACAM6P40199 344 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 BRWD1-AS2P59051 145 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 NCS1P62166 190 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 KIAA0141Q14154 515 aaPredicted RBP4.49□□□□□ -1.69
CUX1-208ENST00000485792 ABCA11PQ4W5N1 156 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 TMEM177Q53S58 311 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 RPL39P5Q59GN2 51 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 KPRPQ5T749 579 aaPredicted RBP4.49□□□□□ -1.69
CUX1-208ENST00000485792 ZNF660Q6AZW8 331 aaPredicted RBP4.49□□□□□ -1.69
CUX1-208ENST00000485792 NDUFA11Q86Y39 141 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 C11orf44Q8N8P7 122 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 OR2AK2Q8NG84 335 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 CAPSLQ8WWF8 208 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 MRPL20Q9BYC9 149 aaKnown RBP4.49□□□□□ -1.69
CUX1-208ENST00000485792 MMP27Q9H306 513 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 AUNIPQ9H7T9 357 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 RDH8Q9NYR8 311 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 ZNF230Q9UIE0 474 aaPredicted RBP4.49□□□□□ -1.69
CUX1-208ENST00000485792 ZNF107Q9UII5 783 aaPredicted RBP4.49□□□□□ -1.69
CUX1-208ENST00000485792 IGKV1D-13A0A0B4J2D9 117 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 LOC100506127A0A0U1RQW1 187 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 TMEM235A6NFC5 223 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 RBMXL2O75526 392 aaKnown RBP4.48□□□□□ -1.69
CUX1-208ENST00000485792 RBBP9O75884 186 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 BRI3O95415 125 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 IGLV2-23P01705 113 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 IGHG4P01861 327 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 OPN1MWP04001 364 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 LPLP06858 475 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 CTXN2P0C2S0 81 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 OPN1MW2P0DN77 364 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 OPN1MW3P0DN78 364 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 IGKV1-13P0DP09 117 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 SLC6A1P30531 599 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 MC5RP33032 325 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 GPR12P47775 334 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 LUMP51884 338 aaPredicted RBP4.48□□□□□ -1.69
CUX1-208ENST00000485792 ACTBP60709 375 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 MXD1Q05195 221 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 MSMO1Q15800 293 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 C5orf64Q2M2E5 130 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 CNIH2Q6PI25 160 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 GLDNQ6ZMI3 551 aaPredicted RBP4.48□□□□□ -1.69
CUX1-208ENST00000485792 LCNL1Q6ZST4 164 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 OVCH2Q7RTZ1 564 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 MOB3BQ86TA1 216 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 HOGA1Q86XE5 327 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 LYSMD2Q8IV50 215 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 PRR18Q8N4B5 295 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 ZNF383Q8NA42 475 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 MINDY2Q8NBR6 621 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 OR5AU1Q8NGC0 362 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 CHPT1Q8WUD6 406 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 NUDCD2Q8WVJ2 157 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 IL1F10Q8WWZ1 152 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 SNAPC3Q92966 411 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 ABHD14BQ96IU4 210 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 NOL4LQ96MY1 436 aaPredicted RBP4.48□□□□□ -1.69
CUX1-208ENST00000485792 GPHA2Q96T91 129 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 BCL7BQ9BQE9 202 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 ATG5Q9H1Y0 275 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 ANXA10Q9UJ72 324 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 OR2W1Q9Y3N9 320 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 NUBP2Q9Y5Y2 271 aa4.48□□□□□ -1.69
CUX1-208ENST00000485792 KMT2CQ8NEZ4 4911 aaKnown RBP4.48□□□□□ -1.69
CUX1-208ENST00000485792 RYR3Q15413 4870 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 IGHV7-81A0A0B4J1V7 117 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 A0A1B0GW64 132 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 SRRM4A7MD48 611 aaKnown RBP4.47□□□□□ -1.69
CUX1-208ENST00000485792 LINC00473A8K010 186 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 M0QZ24 198 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 NBR2O15453 112 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 SOX15O60248 233 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 SPDEFO95238 335 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 APOA1P02647 267 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 IGKV1-16P04430 117 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 EIF4EP06730 217 aaKnown RBP4.47□□□□□ -1.69
CUX1-208ENST00000485792 IL6RP08887 468 aaPredicted RBP4.47□□□□□ -1.69
CUX1-208ENST00000485792 PSMB8P28062 276 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 DUTP33316 252 aaKnown RBP4.47□□□□□ -1.69
CUX1-208ENST00000485792 VDAC2P45880 294 aaPredicted RBP4.47□□□□□ -1.69
CUX1-208ENST00000485792 MECP2P51608 486 aaKnown RBP4.47□□□□□ -1.69
CUX1-208ENST00000485792 VBP1P61758 197 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 LSM3P62310 102 aaKnown RBP4.47□□□□□ -1.69
CUX1-208ENST00000485792 HNF4GQ14541 408 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 C2orf68Q2NKX9 166 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 KLK9Q2XQG4 91 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 UBE2NLQ5JXB2 153 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 IDNKQ5T6J7 187 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 ASPHD1Q5U4P2 390 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 GPR107Q5VW38 600 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 DHRS11Q6UWP2 260 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 PDPNQ86YL7 162 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 CADM3Q8N126 398 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms