RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 GABRA3P34903 492 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 PTGDSP41222 190 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 LHX2P50458 406 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 B3GALT5-AS1P59052 145 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 KRTAP10-9P60411 292 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 ZNF85Q03923 595 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 ZNF92Q03936 586 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 UBE2SQ16763 222 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 ZNF181Q2M3W8 571 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 TTC32Q5I0X7 151 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 SPANXN3Q5MJ09 141 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 BCL2L15Q5TBC7 163 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 ZNF324BQ6AW86 544 aaPredicted RBP3.64□□□□□ -1.83
RTN4-213ENST00000485749 EIF5AL1Q6IS14 154 aaKnown RBP3.64□□□□□ -1.83
RTN4-213ENST00000485749 FAAP20Q6NZ36 180 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 ZNF720Q7Z2F6 126 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 C1QL2Q7Z5L3 287 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 ZNF695Q8IW36 515 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 ODF3L1Q8IXM7 274 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 FTMTQ8N4E7 242 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 FAM71E2Q8N5Q1 922 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 SAMD12Q8N8I0 201 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 ZNF615Q8N8J6 731 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 TMEM178AQ8NBL3 297 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 OR8S1Q8NH09 359 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 SECTM1Q8WVN6 248 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 FAM151AQ8WW52 585 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 TMEM54Q969K7 222 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 PRADC1Q9BSG0 188 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 TMEM147Q9BVK8 224 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 TM2D1Q9BX74 207 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 RBM38Q9H0Z9 239 aaKnown RBP3.64□□□□□ -1.83
RTN4-213ENST00000485749 ZBP1Q9H171 429 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 RNF122Q9H9V4 155 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 PLEKHA3Q9HB20 300 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 ZNF331Q9NQX6 463 aaPredicted RBP3.64□□□□□ -1.83
RTN4-213ENST00000485749 EHFQ9NZC4 300 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 BOKQ9UMX3 212 aaPredicted RBP3.64□□□□□ -1.83
RTN4-213ENST00000485749 AP4S1Q9Y587 144 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 RFNGQ9Y644 331 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 CACNA1SQ13698 1873 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 TOGARAM1Q9Y4F4 1720 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 MYH13Q9UKX3 1938 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 LAMB1P07942 1786 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 SCN7AQ01118 1682 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 IGKV6D-41A0A0C4DH26 115 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 LY6G6EA0A0G2JKS1 128 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 OR4C45A6NMZ5 311 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 ZNF850A8MQ14 1090 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 BBIP1A8MTZ0 92 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 J3QT63 122 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 DPM2O94777 84 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 CSN2P05814 226 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 HLA-DOBP13765 273 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 ZNF140P52738 457 aaPredicted RBP3.63□□□□□ -1.83
RTN4-213ENST00000485749 RHOGP84095 191 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 TMEM267Q0VDI3 215 aaPredicted RBP3.63□□□□□ -1.83
RTN4-213ENST00000485749 ARFRP1Q13795 201 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 PAFAH1B3Q15102 231 aaKnown RBP3.63□□□□□ -1.83
RTN4-213ENST00000485749 MMDQ15546 238 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 ODF3L2Q3SX64 289 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 ZNF260Q3ZCT1 412 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 PYY3Q5JQD4 70 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 IBA57Q5T440 356 aaKnown RBP3.63□□□□□ -1.83
RTN4-213ENST00000485749 MORN5Q5VZ52 161 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 SPATA31B1PQ5VZV4 182 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 SLC35E4Q6ICL7 350 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 RPL22L1Q6P5R6 122 aaKnown RBP3.63□□□□□ -1.83
RTN4-213ENST00000485749 PRSS54Q6PEW0 395 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 CNIH2Q6PI25 160 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 ALKAL1Q6UXT8 129 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.63□□□□□ -1.83
RTN4-213ENST00000485749 OR11G2Q8NGC1 345 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 OR8B12Q8NGG6 310 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 OR51A4Q8NGJ6 313 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 PPTC7Q8NI37 304 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 LMO3Q8TAP4 145 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 ZNRF4Q8WWF5 429 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 SRSF12Q8WXF0 261 aaKnown RBP3.63□□□□□ -1.83
RTN4-213ENST00000485749 DEDD2Q8WXF8 326 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 TMEM106AQ96A25 262 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 RDH12Q96NR8 316 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 SIGLEC12Q96PQ1 595 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 THTPAQ9BU02 230 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 TMEM222Q9H0R3 208 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 GTSF1LQ9H1H1 148 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 WDR13Q9H1Z4 485 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 PRO1933Q9H354 126 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 MARCH5Q9NX47 278 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 TMEM216Q9P0N5 145 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 SLC2A6Q9UGQ3 507 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 WASHC3Q9Y3C0 194 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 YTHDF2Q9Y5A9 579 aaKnown RBP3.63□□□□□ -1.83
RTN4-213ENST00000485749 KIAA1551Q9HCM1 1747 aa3.63□□□□□ -1.83
RTN4-213ENST00000485749 NHSL1Q5SYE7 1610 aa3.62□□□□□ -1.83
RTN4-213ENST00000485749 MYH6P13533 1939 aa3.62□□□□□ -1.83
RTN4-213ENST00000485749 MYH2Q9UKX2 1941 aa3.62□□□□□ -1.83
RTN4-213ENST00000485749 LAMB2P55268 1798 aa3.62□□□□□ -1.83
RTN4-213ENST00000485749 RGPD5Q99666 1765 aa3.62□□□□□ -1.83
RTN4-213ENST00000485749 hCG_1818297A0A087WSY0 165 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms