RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 GSG1Q2KHT4 349 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 C1orf195Q5TG92 126 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 SLC22A24Q8N4F4 322 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 TCEANCQ8N8B7 351 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 OR4M2Q8NGB6 313 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 RDH5Q92781 318 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 NEUROG1Q92886 237 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 MAL2Q969L2 176 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 PGLYRP3Q96LB9 341 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 LINC00477Q96M19 166 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 WFDC6Q9BQY6 131 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 MLST8Q9BVC4 326 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 MEGF9Q9H1U4 602 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 ELL3Q9HB65 397 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-205ENST00000485055 CCDC167Q9P0B6 97 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 PRRC2CQ9Y520 2896 aaKnown RBP4.29□□□□□ -1.72
CCDC39-205ENST00000485055 DAPL1A0PJW8 107 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 IGSF23A1L1A6 192 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF503-AS2A6NEH8 195 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-205ENST00000485055 SULT1C4O75897 302 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 AVPP01185 164 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 IFNGP01579 166 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 IGHG1P01857 330 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 OR3A4PP47883 348 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 PCBD1P61457 104 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 IFITM2Q01629 132 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 CEACAM16Q2WEN9 425 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 UNQ9370/PRO34162Q6UXP9 181 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 MDP1Q86V88 176 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 GEMIN6Q8WXD5 167 aaKnown RBP4.29□□□□□ -1.72
CCDC39-205ENST00000485055 ARPC1AQ92747 370 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 RASL11BQ9BPW5 248 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 TCEAL7Q9BRU2 100 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 MND1Q9BWT6 205 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 OR51J1Q9H342 316 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 RIMS3Q9UJD0 308 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 IGHV4-30-2A0A087WSY4 118 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 TRDCB7Z8K6 153 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 M0R1B8 84 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 TRMUO75648 421 aaKnown RBP4.29□□□□□ -1.72
CCDC39-205ENST00000485055 RBP2P50120 134 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF83P51522 516 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 SMIM11AP58511 58 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 NCALDP61601 193 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 OR5I1Q13606 314 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 C1DQ13901 141 aaKnown RBP4.29□□□□□ -1.72
CCDC39-205ENST00000485055 LAGE3Q14657 143 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 TMEM128Q5BJH2 165 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 FAM78BQ5VT40 261 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 SLC16A13Q7RTY0 426 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 OVOL2Q9BRP0 275 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 FNDC4Q9H6D8 234 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-205ENST00000485055 SERTAD4Q9NUC0 356 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 JPT1Q9UK76 154 aa4.29□□□□□ -1.72
CCDC39-205ENST00000485055 TRBV5-5A0A0J9YX44 114 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 A0A1W2PPI3 338 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF726A6NNF4 738 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 CEACAM18A8MTB9 384 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 PPP5D1E7EU14 171 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 TNFRSF13BO14836 293 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-205ENST00000485055 TCF21O43680 179 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 NCR1O76036 304 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 OR4A8P0C604 315 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 RRAS2P62070 204 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-205ENST00000485055 CDK10Q15131 360 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 RSU1Q15404 277 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 SRSF7Q16629 238 aaKnown RBP eCLIP4.28□□□□□ -1.72
CCDC39-205ENST00000485055 TMEM155Q4W5P6 130 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 CYBRD1Q53TN4 286 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 FAM120AOSQ5T036 256 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 FAM19A5Q7Z5A7 132 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-205ENST00000485055 C1QL2Q7Z5L3 287 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 CARM1Q86X55 608 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 BPIFB2Q8N4F0 458 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 RFLNBQ8N5W9 214 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 TMEM86BQ8N661 226 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 RCHY1Q96PM5 261 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 OR8B4Q96RC9 309 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 CMSS1Q9BQ75 279 aaKnown RBP4.28□□□□□ -1.72
CCDC39-205ENST00000485055 AGMATQ9BSE5 352 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 MED31Q9Y3C7 131 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 ENPP4Q9Y6X5 453 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 ITPR3Q14573 2671 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 RPS10-NUDT3A0A1W2PQS6 291 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 C15orf65H3BRN8 121 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 H7C2Y5 167 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 MRASO14807 208 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 FFAR1O14842 300 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 RGS5O15539 181 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 NUDT3O95989 172 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 IFNA10P01566 189 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 CDC42P60953 191 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 CDK5Q00535 292 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 RPL18Q07020 188 aaKnown RBP4.28□□□□□ -1.72
CCDC39-205ENST00000485055 HNRNPA0Q13151 305 aaKnown RBP4.28□□□□□ -1.72
CCDC39-205ENST00000485055 OXA1LQ15070 435 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 SFXN4Q6P4A7 337 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 FBXW12Q6X9E4 464 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms