RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 CEP170Q5SW79 1584 aa2.51□□□□□ -2.01
VPS13A-211ENST00000484581 THSD7AQ9UPZ6 1657 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 APOMO95445 188 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 IGHMP01871 453 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 ATP6V0CP27449 155 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 OR4D2P58180 307 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 TAS2R45P59539 299 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 SPCS3P61009 180 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 EIF4EBP2Q13542 120 aaPredicted RBP2.5□□□□□ -2.01
VPS13A-211ENST00000484581 MRPL51Q4U2R6 128 aaKnown RBP2.5□□□□□ -2.01
VPS13A-211ENST00000484581 AMMECR1LQ6DCA0 310 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 IGFL1Q6UW32 110 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 LRRC34Q8IZ02 419 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 C1orf158Q8N1D5 194 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 OR5B17Q8NGF7 314 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 R4GN34 69 aa2.5□□□□□ -2.01
VPS13A-211ENST00000484581 ATG2BQ96BY7 2078 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 DICER1Q9UPY3 1922 aaKnown RBP2.49□□□□□ -2.01
VPS13A-211ENST00000484581 A0A1B0GU33 70 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 A0A1B0GV50 99 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 GGTLC3B5MD39 225 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 PRB2P02812 416 aaPredicted RBP2.49□□□□□ -2.01
VPS13A-211ENST00000484581 FAM228BP0C875 321 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 CCL1P22362 96 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 CDK9P50750 372 aaKnown RBP2.49□□□□□ -2.01
VPS13A-211ENST00000484581 BTN3A2P78410 334 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 IL15RAQ13261 267 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 PMAIP1Q13794 54 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 IGFBP7Q16270 282 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 KRTAP25-1Q3LHN0 102 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 SPIN3Q5JUX0 258 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 DEFB125Q8N687 156 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 Q8NAQ8 132 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 OR51D1Q8NGF3 324 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 ABCG5Q9H222 651 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 DUSP21Q9H596 190 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 CRB1P82279 1406 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 SSH2Q76I76 1423 aa2.49□□□□□ -2.01
VPS13A-211ENST00000484581 ADGRL1O94910 1474 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 OR6C6A6NF89 314 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 SMIM9A6NGZ8 99 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 NSA2O95478 260 aaKnown RBP2.48□□□□□ -2.01
VPS13A-211ENST00000484581 HLA-DQB2P05538 268 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 MAP2K4P45985 399 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 CAPZBP47756 277 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 TSPEAR-AS2P59090 65 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 SPA17Q15506 151 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 FAM201AQ5SY85 155 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 PRR9Q5T870 116 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 C5orf46Q6UWT4 87 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 CALHM3Q86XJ0 350 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 BAP18Q8IXM2 172 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 EIF4E3Q8N5X7 224 aaKnown RBP2.48□□□□□ -2.01
VPS13A-211ENST00000484581 OR1L8Q8NGR8 309 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 OR2T27Q8NH04 317 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 SLC25A44Q96H78 314 aaPredicted RBP2.48□□□□□ -2.01
VPS13A-211ENST00000484581 OR52E6Q96RD3 313 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 VPREB3Q9UKI3 123 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 PXMP4Q9Y6I8 212 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.48□□□□□ -2.01
VPS13A-211ENST00000484581 FLT4P35916 1363 aa2.48□□□□□ -2.01
VPS13A-211ENST00000484581 DSCAMO60469 2012 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 ZBED9Q6R2W3 1325 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 LCTP09848 1927 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 DHRS12A0PJE2 317 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 IGSF23A1L1A6 192 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 OR4C45A6NMZ5 311 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 A8MWP6 167 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 EEF1E1-BLOC1S5C9J1V9 151 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 CHP2O43745 196 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 FADS1O60427 444 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 CD79AP11912 226 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 ARF6P62330 175 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 IFITM2Q01629 132 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 TMED2Q15363 201 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 SLC9A3R2Q15599 337 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 ACOT6Q3I5F7 207 aaPredicted RBP2.47□□□□□ -2.01
VPS13A-211ENST00000484581 ALKAL1Q6UXT8 129 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 SDIM1Q6ZPB5 146 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 SCXQ7RTU7 201 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 LYPD6Q86Y78 171 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 MUC7Q8TAX7 377 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 GNPNAT1Q96EK6 184 aaPredicted RBP2.47□□□□□ -2.01
VPS13A-211ENST00000484581 CCL13Q99616 98 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 UPK3BQ9BT76 320 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 C11orf1Q9H5F2 150 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 ASF1BQ9NVP2 202 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 ANAPC10Q9UM13 185 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 ADGRL3Q9HAR2 1447 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 SHROOM3Q8TF72 1996 aa2.47□□□□□ -2.01
VPS13A-211ENST00000484581 SPATA31E1Q6ZUB1 1445 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 IGHV1-69-2A0A0G2JMI3 117 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 SLC17A3O00476 420 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 CPSF4O95639 269 aaKnown RBP2.46□□□□□ -2.02
VPS13A-211ENST00000484581 ESDP10768 282 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 NPPCP23582 126 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 FABP9Q0Z7S8 132 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 EDDM3AQ14507 147 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 ZNF141Q15928 474 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 RASL11AQ6T310 242 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms