RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 OR2K2Q8NGT1 345 aa9.66□□□□□ -0.86
UBR4-213ENST00000483922 PTX4Q96A99 478 aa9.66□□□□□ -0.86
UBR4-213ENST00000483922 C5orf30Q96GV9 206 aa9.66□□□□□ -0.86
UBR4-213ENST00000483922 TSNAXQ99598 290 aaKnown RBP9.66□□□□□ -0.86
UBR4-213ENST00000483922 ZNF230Q9UIE0 474 aaPredicted RBP9.66□□□□□ -0.86
UBR4-213ENST00000483922 DNAH17Q9UFH2 4485 aa9.66□□□□□ -0.86
UBR4-213ENST00000483922 MSGN1A6NI15 193 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 DEDDO75618 318 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 OR2A4O95047 310 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 CNIH1O95406 144 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 AADACP22760 399 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 KIR2DS2P43631 304 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 RPS27AP62979 156 aaKnown RBP9.65□□□□□ -0.86
UBR4-213ENST00000483922 QRFPP83859 136 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 RPEL1Q2QD12 228 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 TMPRSS11AQ6ZMR5 421 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 ADAD2Q8NCV1 583 aaKnown RBP9.65□□□□□ -0.86
UBR4-213ENST00000483922 WDR89Q96FK6 387 aaPredicted RBP9.65□□□□□ -0.86
UBR4-213ENST00000483922 AKIP1Q9NQ31 210 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 ZC4H2Q9NQZ6 224 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 ABRACLQ9P1F3 81 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 CKLFQ9UBR5 152 aa9.65□□□□□ -0.86
UBR4-213ENST00000483922 TRBV6-6A0A0A6YYG2 114 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 TRBV9A0A0B4J1U6 114 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 PNMA8CA0A1B0GUJ8 204 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 DYNC1I1O14576 645 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 PMS2P11Q13670 270 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 TATDN3Q17R31 274 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 LRRTM1Q86UE6 522 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 PDPNQ86YL7 162 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 LAX1Q8IWV1 398 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 SETD6Q8TBK2 473 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 SNAPC3Q92966 411 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 USMG5Q96IX5 58 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 NEDD4LQ96PU5 975 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 TM2D1Q9BX74 207 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 AK3Q9UIJ7 227 aa9.64□□□□□ -0.87
UBR4-213ENST00000483922 DIMT1Q9UNQ2 313 aaKnown RBP9.64□□□□□ -0.87
UBR4-213ENST00000483922 FOXI3A8MTJ6 420 aaPredicted RBP9.63□□□□□ -0.87
UBR4-213ENST00000483922 PPP5D1E7EU14 171 aa9.63□□□□□ -0.87
UBR4-213ENST00000483922 SOCS1O15524 211 aa9.63□□□□□ -0.87
UBR4-213ENST00000483922 HLA-AP01891 365 aaKnown RBP9.63□□□□□ -0.87
UBR4-213ENST00000483922 CD37P11049 281 aa9.63□□□□□ -0.87
UBR4-213ENST00000483922 FOLR2P14207 255 aa9.63□□□□□ -0.87
UBR4-213ENST00000483922 TMEM50BP56557 158 aa9.63□□□□□ -0.87
UBR4-213ENST00000483922 C1orf100Q5SVJ3 147 aa9.63□□□□□ -0.87
UBR4-213ENST00000483922 CACNG8Q8WXS5 425 aa9.63□□□□□ -0.87
UBR4-213ENST00000483922 TMEM68Q96MH6 324 aa9.63□□□□□ -0.87
UBR4-213ENST00000483922 UQCC2Q9BRT2 126 aa9.63□□□□□ -0.87
UBR4-213ENST00000483922 COA4Q9NYJ1 87 aa9.63□□□□□ -0.87
UBR4-213ENST00000483922 DYNC1H1Q14204 4646 aaKnown RBP9.63□□□□□ -0.87
UBR4-213ENST00000483922 PKHD1P08F94 4074 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 A0A0J9YWU9 116 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 C2orf70A6NJV1 201 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 TMEM14DPA8MWL7 114 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 AIREO43918 545 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 CD3GP09693 182 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 ZBTB25P24278 435 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 LGALS7P47929 136 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 RHOGP84095 191 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 GUCA2BQ16661 112 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 CEMP1Q6PRD7 247 aaPredicted RBP9.62□□□□□ -0.87
UBR4-213ENST00000483922 C19orf35Q6ZS72 473 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 KCNG3Q8TAE7 436 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 GGHQ92820 318 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 CHMP1AQ9HD42 196 aaPredicted RBP9.62□□□□□ -0.87
UBR4-213ENST00000483922 Q9N2K0 584 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 SLC35D1Q9NTN3 355 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 SLC2A8Q9NY64 477 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 PEMTQ9UBM1 199 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 GHRLQ9UBU3 117 aa9.62□□□□□ -0.87
UBR4-213ENST00000483922 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.61□□□□□ -0.87
UBR4-213ENST00000483922 CXorf65A6NEN9 183 aa9.61□□□□□ -0.87
UBR4-213ENST00000483922 M0R1X1 148 aa9.61□□□□□ -0.87
UBR4-213ENST00000483922 HLA-DRB3P79483 266 aa9.61□□□□□ -0.87
UBR4-213ENST00000483922 TMEM177Q53S58 311 aa9.61□□□□□ -0.87
UBR4-213ENST00000483922 LAIR2Q6ISS4 152 aa9.61□□□□□ -0.87
UBR4-213ENST00000483922 EDARADDQ8WWZ3 215 aa9.61□□□□□ -0.87
UBR4-213ENST00000483922 TMEM80Q96HE8 168 aa9.61□□□□□ -0.87
UBR4-213ENST00000483922 LPAR5Q9H1C0 372 aa9.61□□□□□ -0.87
UBR4-213ENST00000483922 SDHAF2Q9NX18 166 aa9.61□□□□□ -0.87
UBR4-213ENST00000483922 RDH8Q9NYR8 311 aa9.61□□□□□ -0.87
UBR4-213ENST00000483922 EXOSC1Q9Y3B2 195 aaKnown RBP9.61□□□□□ -0.87
UBR4-213ENST00000483922 OR2C1O95371 312 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 OR9G9P0C7N8 305 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 CELP19835 753 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 ATP5G2Q06055 141 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 EXOSC2Q13868 293 aaKnown RBP9.6□□□□□ -0.87
UBR4-213ENST00000483922 IDO2Q6ZQW0 420 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 TMEM61Q8N0U2 210 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 FAM89BQ8N5H3 189 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 NKAIN3Q8N8D7 197 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 DDB2Q92466 427 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 TMEM59Q9BXS4 323 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 PLEKHJ1Q9NW61 149 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 MLXQ9UH92 298 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 ZNF221Q9UK13 617 aa9.6□□□□□ -0.87
UBR4-213ENST00000483922 PKD1P98161 4303 aa9.59□□□□□ -0.87
UBR4-213ENST00000483922 A0A0B4J203 849 aa9.59□□□□□ -0.87
UBR4-213ENST00000483922 E7EUB6 86 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms