RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	OR4C13	Q8NGP0	309 aa		11.91	□□□□□ -0.5
NR1H3-222	ENST00000483882	EDARADD	Q8WWZ3	215 aa		11.91	□□□□□ -0.5
NR1H3-222	ENST00000483882	PPP1R14B	Q96C90	147 aa		11.91	□□□□□ -0.5
NR1H3-222	ENST00000483882	NABP2	Q9BQ15	211 aa		11.91	□□□□□ -0.5
NR1H3-222	ENST00000483882	MRPL20	Q9BYC9	149 aa	Known RBP	11.91	□□□□□ -0.5
NR1H3-222	ENST00000483882	OR2W1	Q9Y3N9	320 aa		11.91	□□□□□ -0.5
NR1H3-222	ENST00000483882	NOTCH1	P46531	2555 aa		11.91	□□□□□ -0.5
NR1H3-222	ENST00000483882	LINC00854	A0A1B0GVQ3	168 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882		M0QYG6	137 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	RAB29	O14966	203 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	LYRM1	O43325	122 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	CD3D	P04234	171 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	IL3RA	P26951	378 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	DHRS11	Q6UWP2	260 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	TGIF2LX	Q8IUE1	241 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	TMEM229B	Q8NBD8	167 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	OR4D10	Q8NGI6	311 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	OR5H2	Q8NGV7	314 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	OR56B4	Q8NH76	319 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	ENKUR	Q8TC29	256 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	GIMAP1	Q8WWP7	306 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	SDHAF2	Q9NX18	166 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	EHF	Q9NZC4	300 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	PIPOX	Q9P0Z9	390 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	GAB2	Q9UQC2	676 aa		11.9	□□□□□ -0.5
NR1H3-222	ENST00000483882	CHST1	O43916	411 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	CD74	P04233	296 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	ZNF735	P0CB33	412 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	CT45A6	P0DMU7	189 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	CT45A5	P0DMU8	189 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	CT45A7	P0DMV0	189 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	TAS2R46	P59540	309 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	VAX1	Q5SQQ9	334 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	CCDC144NL	Q6NUI1	221 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	MOB3B	Q86TA1	216 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	KLHDC1	Q8N7A1	406 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	OR2T6	Q8NHC8	308 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	C7orf50	Q9BRJ6	194 aa	Known RBP	11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	OR2D2	Q9H210	308 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	RAB18	Q9NP72	206 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	TCF19	Q9Y242	345 aa		11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	TET2	Q6N021	2002 aa	Predicted RBP	11.89	□□□□□ -0.51
NR1H3-222	ENST00000483882	ANKRD20A5P	A0PJZ0	165 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882		G3V4G9	280 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	PPY	P01298	95 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	SNRNP70	P08621	437 aa	Known RBP	11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	VSIG10L2	P0DP72	767 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	GPR12	P47775	334 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	LUM	P51884	338 aa	Predicted RBP	11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	ACTB	P60709	375 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	SSBP1	Q04837	148 aa	Known RBP	11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	EBI3	Q14213	229 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	FAM71F2	Q6NXP2	309 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	C11orf88	Q6PI97	169 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	TMEM219	Q86XT9	240 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	THNSL2	Q86YJ6	484 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	ZNF383	Q8NA42	475 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	NPFFR1	Q9GZQ6	430 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	ZNF107	Q9UII5	783 aa	Predicted RBP	11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	ZNF221	Q9UK13	617 aa		11.88	□□□□□ -0.51
NR1H3-222	ENST00000483882	FAAP20	Q6NZ36	180 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	STEAP1B	Q6NZ63	245 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	CADM3	Q8N126	398 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	TOMM5	Q8N4H5	51 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882		Q8N6K4	173 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	DUSP18	Q8NEJ0	188 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	CAPSL	Q8WWF8	208 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	MOB3A	Q96BX8	217 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	RITA1	Q96K30	269 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	S1PR3	Q99500	378 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	FXYD6	Q9H0Q3	95 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	GHITM	Q9H3K2	345 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	CCL28	Q9NRJ3	127 aa		11.87	□□□□□ -0.51
NR1H3-222	ENST00000483882	FAM240B	A0A1B0GVZ2	78 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	OR5H14	A6NHG9	310 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	CENPX	A8MT69	81 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882		M0R1X1	148 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	TXNL1	O43396	289 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	RAB3D	O95716	219 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	IGKV1D-33	P01593	117 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	IGKV1-33	P01594	117 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	OPN1MW	P04001	364 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	OPN1MW2	P0DN77	364 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	OPN1MW3	P0DN78	364 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	CD1B	P29016	333 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	BRS3	P32247	399 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	TAS2R19	P59542	299 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	FXYD4	P59646	89 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	RPL30	P62888	115 aa	Known RBP	11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	KLF9	Q13886	244 aa	Predicted RBP	11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	HNF4G	Q14541	408 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	BEAN1	Q3B7T3	259 aa		11.86	□□□□□ -0.51
NR1H3-222	ENST00000483882	ACTBL2	Q562R1	376 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms