RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 KBTBD11O94819 623 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 PRAMEF6Q5VXH4 476 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 ACSM6Q6P461 480 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 FAM216AQ8WUB2 273 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 EDARADDQ8WWZ3 215 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 SLC25A22Q9H936 323 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 AQP7O14520 342 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 IGKV1D-33P01593 117 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 IGKV1-33P01594 117 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 CD81P60033 236 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 HTD2P86397 168 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 Q3ZCU0 254 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 SARAFQ96BY9 339 aa12.85□□□□□ -0.35
C9orf3-218ENST00000482056 PMS2P5A8MQ11 134 aa12.84□□□□□ -0.35
C9orf3-218ENST00000482056 SOX15O60248 233 aa12.84□□□□□ -0.35
C9orf3-218ENST00000482056 PTBP3O95758 552 aaKnown RBP12.84□□□□□ -0.35
C9orf3-218ENST00000482056 CD55P08174 381 aa12.84□□□□□ -0.35
C9orf3-218ENST00000482056 TRGC1P0CF51 173 aa12.84□□□□□ -0.35
C9orf3-218ENST00000482056 GNB2P62879 340 aa12.84□□□□□ -0.35
C9orf3-218ENST00000482056 RPP30P78346 268 aaKnown RBP12.84□□□□□ -0.35
C9orf3-218ENST00000482056 VWC2Q2TAL6 325 aa12.84□□□□□ -0.35
C9orf3-218ENST00000482056 SPNS3Q6ZMD2 512 aa12.84□□□□□ -0.35
C9orf3-218ENST00000482056 OR5B12Q96R08 314 aa12.84□□□□□ -0.35
C9orf3-218ENST00000482056 NPCDR1Q9BY65 106 aa12.84□□□□□ -0.35
C9orf3-218ENST00000482056 PSG11Q9UQ72 335 aa12.84□□□□□ -0.35
C9orf3-218ENST00000482056 DMDP11532 3685 aa12.84□□□□□ -0.35
C9orf3-218ENST00000482056 CECR9P0C854 216 aa12.83□□□□□ -0.35
C9orf3-218ENST00000482056 SSTR5P35346 364 aa12.83□□□□□ -0.35
C9orf3-218ENST00000482056 KIR2DL2P43627 348 aaPredicted RBP12.83□□□□□ -0.35
C9orf3-218ENST00000482056 PAX5Q02548 391 aa12.83□□□□□ -0.35
C9orf3-218ENST00000482056 BSXQ3C1V8 233 aa12.83□□□□□ -0.35
C9orf3-218ENST00000482056 ACOT6Q3I5F7 207 aaPredicted RBP12.83□□□□□ -0.35
C9orf3-218ENST00000482056 MBNL2Q5VZF2 373 aaKnown RBP12.83□□□□□ -0.35
C9orf3-218ENST00000482056 OR13A1Q8NGR1 328 aa12.83□□□□□ -0.35
C9orf3-218ENST00000482056 DMRT1Q9Y5R6 373 aa12.83□□□□□ -0.35
C9orf3-218ENST00000482056 IFITM10A6NMD0 228 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 MARCH11A6NNE9 402 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 FAM90A9PA6NNJ1 464 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 PRR33A8MZF0 331 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 IGHV2-70P01814 119 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 GPR12P47775 334 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 FABP6P51161 128 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 CCL11P51671 97 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 HNF4GQ14541 408 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 Q6ZR03 302 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 OR10A7Q8NGE5 316 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 OR4F5Q8NH21 305 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 PPP1R35Q8TAP8 253 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 LRRC29Q8WV35 223 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 ZDHHC16Q969W1 377 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 RPUSD4Q96CM3 377 aaKnown RBP12.83□□□□□ -0.36
C9orf3-218ENST00000482056 R3HDM4Q96D70 268 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 OR4F4Q96R69 305 aa12.83□□□□□ -0.36
C9orf3-218ENST00000482056 IGHV3-43A0A0B4J1X8 118 aa12.82□□□□□ -0.36
C9orf3-218ENST00000482056 TRAV17A0A0B4J275 112 aa12.82□□□□□ -0.36
C9orf3-218ENST00000482056 ST8SIA5O15466 376 aa12.82□□□□□ -0.36
C9orf3-218ENST00000482056 IGHV3-43DP0DP04 118 aa12.82□□□□□ -0.36
C9orf3-218ENST00000482056 BRWD1-AS2P59051 145 aa12.82□□□□□ -0.36
C9orf3-218ENST00000482056 TFF3Q07654 80 aa12.82□□□□□ -0.36
C9orf3-218ENST00000482056 VWA1Q6PCB0 445 aa12.82□□□□□ -0.36
C9orf3-218ENST00000482056 C16orf82Q7Z2V1 217 aa12.82□□□□□ -0.36
C9orf3-218ENST00000482056 HIST3H2BBQ8N257 126 aa12.82□□□□□ -0.36
C9orf3-218ENST00000482056 FRZBQ92765 325 aa12.82□□□□□ -0.36
C9orf3-218ENST00000482056 MSL2Q9HCI7 577 aa12.82□□□□□ -0.36
C9orf3-218ENST00000482056 SMCO3A2RU48 225 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 LINC00473A8K010 186 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 H7BYZ3 331 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 GZMHP20718 246 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 PRDX2P32119 198 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 TRIP6Q15654 476 aaKnown RBP12.81□□□□□ -0.36
C9orf3-218ENST00000482056 C9orf106Q8NAJ2 232 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 OR10D4PQ8NGN7 298 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 RFESDQ8TAC1 157 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 RAB24Q969Q5 203 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 NEIL1Q96FI4 390 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-218ENST00000482056 PFDN5Q99471 154 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 SRD5A3Q9H8P0 318 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 FZR1Q9UM11 496 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 USF3Q68DE3 2245 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 DIDO1Q9BTC0 2240 aaKnown RBP12.81□□□□□ -0.36
C9orf3-218ENST00000482056 GTF3C1Q12789 2109 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 IGHV2OR16-5A0A0B4J2B6 119 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 DEFB108AA8MXU0 73 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 HMGB3O15347 200 aaKnown RBP12.81□□□□□ -0.36
C9orf3-218ENST00000482056 IGLV1-44P01699 117 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 CDC34P49427 236 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-218ENST00000482056 RPL23P62829 140 aaKnown RBP12.81□□□□□ -0.36
C9orf3-218ENST00000482056 EDDM3AQ14507 147 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 PYY3Q5JQD4 70 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 FAM53AQ6NSI3 398 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-218ENST00000482056 FAM90A1Q86YD7 464 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 TPRX1Q8N7U7 411 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 ABHD5Q8WTS1 349 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 ANAPC16Q96DE5 110 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 PARLQ9H300 379 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 PLSCR4Q9NRQ2 329 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 GNG12Q9UBI6 72 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 METRNQ9UJH8 293 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 JPT1Q9UK76 154 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms