RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 NDE1Q9NXR1 346 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 TRAV8-6A0A0B4J262 113 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 INMT-MINDY4F8WBC2 141 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 TRAF3IP2O43734 574 aaPredicted RBP2.4□□□□□ -2.03
SMC6-208ENST00000481708 PDCD6O75340 191 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 SERPINB7O75635 380 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 PFN1P07737 140 aaKnown RBP2.4□□□□□ -2.03
SMC6-208ENST00000481708 CSF3P09919 207 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 MIPP30301 263 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 FMO3P31513 532 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 GNG3P63215 75 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 ARG2P78540 354 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 C3orf33Q6P1S2 294 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 SLC36A1Q7Z2H8 476 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.4□□□□□ -2.03
SMC6-208ENST00000481708 OR52E4Q8NGH9 312 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 TMED9Q9BVK6 235 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 ARL2BPQ9Y2Y0 163 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 SETD2Q9BYW2 2564 aaPredicted RBP2.4□□□□□ -2.03
SMC6-208ENST00000481708 S1PR2O95136 353 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 KRT75O95678 551 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 CRYGDP07320 174 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 MSNP26038 577 aaKnown RBP2.4□□□□□ -2.03
SMC6-208ENST00000481708 RPA3P35244 121 aaPredicted RBP2.4□□□□□ -2.03
SMC6-208ENST00000481708 MAP2K4P45985 399 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 GTF2A1P52655 376 aaPredicted RBP2.4□□□□□ -2.03
SMC6-208ENST00000481708 TRAF2Q12933 501 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 ELOCQ15369 112 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 TOMM34Q15785 309 aaPredicted RBP2.4□□□□□ -2.03
SMC6-208ENST00000481708 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 UNQ9165/PRO28630Q6UXU0 137 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 DGAT2L6Q6ZPD8 337 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 CALHM3Q86XJ0 350 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 CBR4Q8N4T8 237 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 ZNF645Q8N7E2 425 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 LINC01587Q99440 93 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 CISHQ9NSE2 258 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 C14orf105Q9NVL8 296 aa2.4□□□□□ -2.03
SMC6-208ENST00000481708 KLF13Q9Y2Y9 288 aaPredicted RBP2.4□□□□□ -2.03
SMC6-208ENST00000481708 ANKRD12Q6UB98 2062 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 ABCA7Q8IZY2 2146 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 A0A1B0GUV1 79 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 CIB4A0PJX0 185 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 SYCE1LA8MT33 242 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 DCTN3O75935 186 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 CCL1P22362 96 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 AK4P27144 223 aaPredicted RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 CDK9P50750 372 aaKnown RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 RAP1GDS1P52306 607 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 JOSD1Q15040 202 aaPredicted RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 MAPK14Q16539 360 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 TTC32Q5I0X7 151 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 ZNF506Q5JVG8 444 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 C1orf146Q5VVC0 180 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 GKN2Q86XP6 184 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 LRRC18Q8N456 261 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 YIPF7Q8N8F6 280 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 OR2K2Q8NGT1 345 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 OR13D1Q8NGV5 346 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 ZFP90Q8TF47 636 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 PYDC1Q8WXC3 89 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 ARHGDIGQ99819 225 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 MRPL27Q9P0M9 148 aaKnown RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 CACNA1DQ01668 2161 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 DOCK10Q96BY6 2186 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 FLNCQ14315 2725 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 SHISA9B4DS77 424 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 SOCS3O14543 225 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 GIG44P09565 113 aaPredicted RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 ZBTB25P24278 435 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 PEBP1P30086 187 aaKnown RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 SULT1A1P50225 295 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 SULT1A2P50226 295 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 TAS2R46P59540 309 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 NAA20P61599 178 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 CYCSP99999 105 aaKnown RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 ACOT6Q3I5F7 207 aaPredicted RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 CGB2Q6NT52 195 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 CYHR1Q6ZMK1 362 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 RNF165Q6ZSG1 346 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 Q6ZSR6 202 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 NAA40Q86UY6 237 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 OR11H7Q8NGC8 314 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 SIGMAR1Q99720 223 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 ZNF436Q9C0F3 470 aaPredicted RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 ISG20L2Q9H9L3 353 aaKnown RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 ZNF556Q9HAH1 456 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 CTSZQ9UBR2 303 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 DKKL1Q9UK85 242 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 SLC35A3Q9Y2D2 325 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 TEX15Q9BXT5 2789 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 TRAV39A0A0B4J263 110 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 IFITM10A6NMD0 228 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 MFSD11O43934 449 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 UGT2B11O75310 529 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 SPNP16150 400 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 GATA2P23769 480 aaPredicted RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 SLC6A1P30531 599 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 PPOXP50336 477 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms