RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 PDPNQ86YL7 162 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 TGIF2LXQ8IUE1 241 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 ZNF695Q8IW36 515 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 WFDC11Q8NEX6 87 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 OR5AN1Q8NGI8 311 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 OR4S2Q8NH73 311 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 TCTEX1D2Q8WW35 142 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 DDB2Q92466 427 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 RBPMSQ93062 196 aaKnown RBP8.26□□□□□ -1.09
USP39-215ENST00000481409 RPEQ96AT9 228 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 MSI2Q96DH6 328 aaKnown RBP8.26□□□□□ -1.09
USP39-215ENST00000481409 TP53RKQ96S44 253 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 BEX2Q9BXY8 128 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 C7orf69Q9H7B7 122 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 PLEKHA2Q9HB19 425 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 BEX1Q9HBH7 125 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 COMMD9Q9P000 198 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 TNFSF12O43508 249 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 IGHV3-7P01780 117 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 FGF2P09038 288 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 SLC25A6P12236 298 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 COX7A1P24310 79 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 CD1BP29016 333 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 SLC9A3R2Q15599 337 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 TPTE2P1Q5T6R2 138 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 FAM53AQ6NSI3 398 aaPredicted RBP8.25□□□□□ -1.09
USP39-215ENST00000481409 SPAG16Q8N0X2 631 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 OR51H1Q8NH63 302 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 OSR1Q8TAX0 266 aaPredicted RBP8.25□□□□□ -1.09
USP39-215ENST00000481409 CASTOR1Q8WTX7 329 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 LSM10Q969L4 123 aaKnown RBP8.25□□□□□ -1.09
USP39-215ENST00000481409 PPP1R14BQ96C90 147 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 SPIN2AQ99865 258 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 SPIN2BQ9BPZ2 258 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 NABP2Q9BQ15 211 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 ZFP57Q9NU63 452 aa8.25□□□□□ -1.09
USP39-215ENST00000481409 CR1P17927 2039 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 IGHV1-69DA0A0B4J2H0 117 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 CENPVL3A0A0U1RRI6 287 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 A0A1W2PPE3 182 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 FAM90A9PA6NNJ1 464 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 LINC00473A8K010 186 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 NPFFO15130 113 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 HRASP01112 189 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 IGHV1-69P01742 117 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 CT45A6P0DMU7 189 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 CT45A5P0DMU8 189 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 CT45A7P0DMV0 189 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 LGALS7P47929 136 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 DYNLT3P51808 116 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 SRSF4Q08170 494 aaKnown RBP8.24□□□□□ -1.09
USP39-215ENST00000481409 HABP2Q14520 560 aaPredicted RBP8.24□□□□□ -1.09
USP39-215ENST00000481409 AANATQ16613 207 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 POU2AF1Q16633 256 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 ANKRD55Q3KP44 614 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 RPL39P5Q59GN2 51 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 OR52B4Q8NGK2 314 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 OR4C13Q8NGP0 309 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 OR5M8Q8NGP6 311 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 LHX4Q969G2 390 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 C5orf30Q96GV9 206 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 C18orf12Q96KH6 178 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 SLC35D1Q9NTN3 355 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 WASHC3Q9Y3C0 194 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 UNC79Q9P2D8 2635 aa8.24□□□□□ -1.09
USP39-215ENST00000481409 TACC2O95359 2948 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 IGHV1-3A0A0C4DH29 117 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 A0A1B0GVG6 124 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 H0YJW9 148 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 FCGR3BO75015 233 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 SNAPC5O75971 98 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 OR2A4O95047 310 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 GIPP09681 153 aaPredicted RBP8.23□□□□□ -1.09
USP39-215ENST00000481409 FOSL1P15407 271 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 NQO2P16083 231 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 ZNF16P17020 682 aaPredicted RBP8.23□□□□□ -1.09
USP39-215ENST00000481409 BRS3P32247 399 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 ERVK-16P61578 105 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 RPL30P62888 115 aaKnown RBP8.23□□□□□ -1.09
USP39-215ENST00000481409 ZNF585BQ52M93 769 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 TMEM177Q53S58 311 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 UTF1Q5T230 341 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 TMEM268Q5VZI3 342 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 GSG1LQ6UXU4 331 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 SPNS3Q6ZMD2 512 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 C9orf139Q6ZV77 190 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 AKAP14Q86UN6 197 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 THNSL2Q86YJ6 484 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 SELENOHQ8IZQ5 122 aaKnown RBP8.23□□□□□ -1.09
USP39-215ENST00000481409 ZNF383Q8NA42 475 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 VSTM2AQ8TAG5 236 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 NANPQ8TBE9 248 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 FLYWCH2Q96CP2 140 aaKnown RBP8.23□□□□□ -1.09
USP39-215ENST00000481409 RRNAD1Q96FB5 475 aaKnown RBP8.23□□□□□ -1.09
USP39-215ENST00000481409 OR2A7Q96R45 310 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 TMEM160Q9NX00 188 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 COA4Q9NYJ1 87 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 ABCA12Q86UK0 2595 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 ARHGAP32A7KAX9 2087 aa8.23□□□□□ -1.09
USP39-215ENST00000481409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.23□□□□□ -1.092e-7■■■■■ 27.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms