RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 ZNF66Q6ZN08 573 aa9□□□□□ -0.97
CLDN11-205ENST00000480067 OR13C8Q8NGS7 320 aa9□□□□□ -0.97
CLDN11-205ENST00000480067 C5orf30Q96GV9 206 aa9□□□□□ -0.97
CLDN11-205ENST00000480067 JMJD8Q96S16 334 aa9□□□□□ -0.97
CLDN11-205ENST00000480067 SLC25A21Q9BQT8 299 aaPredicted RBP9□□□□□ -0.97
CLDN11-205ENST00000480067 RSRP1Q9BUV0 290 aa9□□□□□ -0.97
CLDN11-205ENST00000480067 POMT1Q9Y6A1 747 aa9□□□□□ -0.97
CLDN11-205ENST00000480067 TCF21O43680 179 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 PGLYRP1O75594 196 aaPredicted RBP8.99□□□□□ -0.97
CLDN11-205ENST00000480067 IGKV1D-33P01593 117 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 IGKV1-33P01594 117 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 APOA2P02652 100 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 PI3P19957 117 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 DEFA1P59665 94 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 DEFA3P59666 94 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 IFITM3Q01628 133 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 TAGLNQ01995 201 aaKnown RBP8.99□□□□□ -0.97
CLDN11-205ENST00000480067 HABP2Q14520 560 aaPredicted RBP8.99□□□□□ -0.97
CLDN11-205ENST00000480067 HNF4GQ14541 408 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 SLC9A3R2Q15599 337 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 MZT2BQ6NZ67 158 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 KCTD9Q7L273 389 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 THNSL2Q86YJ6 484 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 TMEM86BQ8N661 226 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 ZNF383Q8NA42 475 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 OR5AN1Q8NGI8 311 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 PIFOQ8TCI5 191 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 CFHR4Q92496 578 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 MRGPRFQ96AM1 343 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 ZNF486Q96H40 463 aaPredicted RBP8.99□□□□□ -0.97
CLDN11-205ENST00000480067 DUX5Q96PT3 197 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 GPHA2Q96T91 129 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 PITPNC1Q9UKF7 332 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 C14orf166Q9Y224 244 aaKnown RBP8.99□□□□□ -0.97
CLDN11-205ENST00000480067 PRELID3BQ9Y3B1 194 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 A0A0A6YYJ9 748 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 FAM90A9PA6NNJ1 464 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 LINC00473A8K010 186 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 RNF212BA8MTL3 300 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 H0YJW9 148 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 VENTXO95231 258 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 SNRNP70P08621 437 aaKnown RBP8.99□□□□□ -0.97
CLDN11-205ENST00000480067 CCR6P51684 374 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 PIGPP57054 158 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 HILS1P60008 231 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 CATR1Q13166 79 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 CBX3Q13185 183 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 ASAH1Q13510 395 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 RBMS2Q15434 407 aaKnown RBP8.99□□□□□ -0.97
CLDN11-205ENST00000480067 LY6EQ16553 131 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 RTL8BQ17RB0 113 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 LURAP1LQ8IV03 231 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 POC5Q8NA72 575 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 OR2T10Q8NGZ9 312 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 OR51H1Q8NH63 302 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 TCTEX1D2Q8WW35 142 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 SLC2A9Q9NRM0 540 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 COPZ2Q9P299 210 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 TBC1D24Q9ULP9 559 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 GPR132Q9UNW8 380 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 WASHC3Q9Y3C0 194 aa8.99□□□□□ -0.97
CLDN11-205ENST00000480067 FAM240BA0A1B0GVZ2 78 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 DNAJC9-AS1A6NH13 148 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 FCGR3BO75015 233 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 MOSP00540 346 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 RLN1P04808 185 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 CTSDP07339 412 aaPredicted RBP8.98□□□□□ -0.97
CLDN11-205ENST00000480067 RRASP10301 218 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 TMEM11P17152 192 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 RPL30P62888 115 aaKnown RBP8.98□□□□□ -0.97
CLDN11-205ENST00000480067 EIF4EBP1Q13541 118 aaPredicted RBP8.98□□□□□ -0.97
CLDN11-205ENST00000480067 PDPNQ86YL7 162 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 CCDC71LQ8N9Z2 235 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 FLYWCH2Q96CP2 140 aaKnown RBP8.98□□□□□ -0.97
CLDN11-205ENST00000480067 EAF1Q96JC9 268 aaPredicted RBP8.98□□□□□ -0.97
CLDN11-205ENST00000480067 RTBDNQ9BSG5 229 aaPredicted RBP8.98□□□□□ -0.97
CLDN11-205ENST00000480067 C5orf66Q9H5L9 145 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 ESM1Q9NQ30 184 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 SLC35D1Q9NTN3 355 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 VPREB3Q9UKI3 123 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 TCF19Q9Y242 345 aa8.98□□□□□ -0.97
CLDN11-205ENST00000480067 CLDN34H7C241 214 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 MPPED1O15442 326 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 NDUFB6O95139 128 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 IGKV1-16P04430 117 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 SLC6A1P30531 599 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 BTCP35070 178 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 EBI3Q14213 229 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 OR2B11Q5JQS5 317 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 TMED4Q7Z7H5 227 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 TBC1D26Q86UD7 250 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 TMEM219Q86XT9 240 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 ZDHHC22Q8N966 263 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 OR4C13Q8NGP0 309 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 CD300LFQ8TDQ1 290 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 DDB2Q92466 427 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 CHIAQ9BZP6 476 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 VSIG4Q9Y279 399 aa8.97□□□□□ -0.97
CLDN11-205ENST00000480067 TEX13DA0A0J9YY54 714 aaPredicted RBP8.96□□□□□ -0.97
CLDN11-205ENST00000480067 A6NDX4 124 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms