RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 CALHM1Q8IU99 346 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 LYG1Q8N1E2 194 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 COMMD1Q8N668 190 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 Q8N7P7 452 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 BEND2Q8NDZ0 799 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 OR52B4Q8NGK2 314 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 OR13D1Q8NGV5 346 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 OR14K1Q8NGZ2 314 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 OR2G2Q8NGZ5 317 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 PP6455Q8WZ26 134 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 EMG1Q92979 244 aaKnown RBP5.4□□□□□ -1.54
VCP-205ENST00000479300 FOXRED1Q96CU9 486 aaPredicted RBP5.4□□□□□ -1.54
VCP-205ENST00000479300 C10orf35Q96D05 121 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 SLC25A38Q96DW6 304 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 ZNF488Q96MN9 340 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 ISG20L2Q9H9L3 353 aaKnown RBP5.4□□□□□ -1.54
VCP-205ENST00000479300 GAR1Q9NY12 217 aaKnown RBP5.4□□□□□ -1.54
VCP-205ENST00000479300 MTFP1Q9UDX5 166 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 KCNIP3Q9Y2W7 256 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 DYNC2H1Q8NCM8 4307 aaKnown RBP5.4□□□□□ -1.55
VCP-205ENST00000479300 RYR2Q92736 4967 aa5.4□□□□□ -1.55
VCP-205ENST00000479300 A0A087X0M5 115 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 TEX13DA0A0J9YY54 714 aaPredicted RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 A0A1B0GX30 115 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 hADV38S2A0JD32 116 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 ADARB2-AS1A8MUL3 147 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 SEC14L6B5MCN3 397 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 H3BSH0 61 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 K7EIL1 84 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 SRSF10O75494 262 aaKnown RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 CRTAPO75718 401 aaPredicted RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 RLN1P04808 185 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 CD5P06127 495 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 SFTA3P0C7M3 94 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 AMY2BP19961 511 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 CCL1P22362 96 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 GABRR1P24046 479 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 MPZP25189 248 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 CEBPDP49716 269 aaPredicted RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 F2RL1P55085 397 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 MTCP1P56278 107 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 OR12D2P58182 307 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 TAS2R20P59543 309 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 NUTF2P61970 127 aaKnown RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 ACTA2P62736 377 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 ACTG2P63267 376 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 NHLH2Q02577 135 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 COL10A1Q03692 680 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 EDDM3AQ14507 147 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 HERPUD1Q15011 391 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 RHEBQ15382 184 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 LY6EQ16553 131 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 TP53I3Q53FA7 332 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 FAM27D1Q5T7N8 215 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 TMEM42Q69YG0 159 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 TMEM200BQ69YZ2 307 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 EIF5AL1Q6IS14 154 aaKnown RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 ETV3LQ6ZN32 361 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 LHFPL2Q6ZUX7 228 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 SLC25A26Q70HW3 274 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 TRAPPC6BQ86SZ2 158 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 BAP18Q8IXM2 172 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 IZUMO1Q8IYV9 350 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 BATF2Q8N1L9 274 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 SYS1Q8N2H4 156 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 PNKDQ8N490 385 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 CD177Q8N6Q3 437 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 ZNF676Q8N7Q3 588 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 INO80EQ8NBZ0 244 aaPredicted RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 OR5AP2Q8NGF4 316 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 OR56B1Q8NGI3 324 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 OR4C16Q8NGL9 310 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 OR13C3Q8NGS6 347 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 OR2T6Q8NHC8 308 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 R3HDM4Q96D70 268 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 SMIM19Q96E16 107 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 CPNE2Q96FN4 548 aaPredicted RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 SMIM8Q96KF7 97 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 SNX22Q96L94 193 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 NOL4LQ96MY1 436 aaPredicted RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 CLCC1Q96S66 551 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 NKX3-1Q99801 234 aaPredicted RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 SLC25A21Q9BQT8 299 aaPredicted RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 NPFFR1Q9GZQ6 430 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 FGF23Q9GZV9 251 aaPredicted RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 RHOFQ9HBH0 211 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 NECAP2Q9NVZ3 263 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 FBLN5Q9UBX5 448 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 CACFD1Q9UGQ2 172 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 ZNF107Q9UII5 783 aaPredicted RBP5.39□□□□□ -1.55
VCP-205ENST00000479300 PITPNC1Q9UKF7 332 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 TMED3Q9Y3Q3 217 aa5.39□□□□□ -1.55
VCP-205ENST00000479300 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 STAB2Q8WWQ8 2551 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 TRBV6-7A0A0A0MS04 114 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 LOC107986453A0A1B0GWG9 222 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 IFITM5A6NNB3 132 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 MARCH11A6NNE9 402 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 PRR32B1ATL7 298 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 J3QLW9 94 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms