RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 VPS13CQ709C8 3753 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 NAV3Q8IVL0 2385 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 IGHV2-26A0A0B4J1V2 119 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 A0A1W2PPE3 182 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 A0A1W2PRX2 142 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 CRYM-AS1A6NIL9 109 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 SNRPGP15A8MWD9 76 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 HSD17B6O14756 317 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 SFT2D2O95562 160 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 LY86O95711 162 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 IGHV3-7P01780 117 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 HLA-AP01891 365 aaKnown RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 OR4E1P0C645 316 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 MMP9P14780 707 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 AKR1C4P17516 323 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 RAB7AP51149 207 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 BCAP31P51572 246 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 ZNF134P52741 427 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 PIGPP57054 158 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 SUPT4H1P63272 117 aaKnown RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 DHODHQ02127 395 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 LOXL1Q08397 574 aaPredicted RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 DHRS2Q13268 280 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 EIF4EBP1Q13541 118 aaPredicted RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 ABCA11PQ4W5N1 156 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 C4orf46Q504U0 113 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 TMEM128Q5BJH2 165 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 CT45A1Q5HYN5 189 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 METTL11BQ5VVY1 283 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 ZNF626Q68DY1 528 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 SLC25A48Q6ZT89 311 aaKnown RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 LYG2Q86SG7 212 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 CADM3Q8N126 398 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 Q8N1X5 172 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 LINC00311Q8N616 119 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 DRAM1Q8N682 238 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 CCDC71LQ8N9Z2 235 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 OR52B4Q8NGK2 314 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 CT45A3Q8NHU0 189 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 ZNF596Q8TC21 504 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 ZNF431Q8TF32 576 aaPredicted RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 RTN4IP1Q8WWV3 396 aaPredicted RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 AKR1E2Q96JD6 320 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 SIRPDQ9H106 197 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 TMEM133Q9H2Q1 129 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 OR51J1Q9H342 316 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 NAA60Q9H7X0 242 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 METTL8Q9H825 291 aaKnown RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 UNKLQ9H9P5 680 aaKnown RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 LPAR2Q9HBW0 351 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 GPN1Q9HCN4 374 aaPredicted RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 MMP26Q9NRE1 261 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 ZNRD1Q9P1U0 126 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 RBM7Q9Y580 266 aaKnown RBP5.41□□□□□ -1.54
USP48-208ENST00000479177 KPTNQ9Y664 436 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 CELSR1Q9NYQ6 3014 aa5.41□□□□□ -1.54
USP48-208ENST00000479177 SAA2-SAA4A0A096LPE2 208 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 TEX13DA0A0J9YY54 714 aaPredicted RBP5.4□□□□□ -1.54
USP48-208ENST00000479177 hCG_1809904A0A1W2PP81 198 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 A0A1W2PPE2 198 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 A0A1W2PR64 198 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 A0A1W2PRV1 198 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 C9orf170A2RU37 121 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 J3QR06 171 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 MPPED1O15442 326 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 CREBL2O60519 120 aaPredicted RBP5.4□□□□□ -1.54
USP48-208ENST00000479177 PGLYRP1O75594 196 aaPredicted RBP5.4□□□□□ -1.54
USP48-208ENST00000479177 SLC22A5O76082 557 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 MSMBP08118 114 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 SAA2P0DJI9 122 aaPredicted RBP5.4□□□□□ -1.54
USP48-208ENST00000479177 PRTN3P24158 256 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 COX7A1P24310 79 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 GPR12P47775 334 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 ZNF137PP52743 207 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 DVL1P1P54792 670 aaPredicted RBP5.4□□□□□ -1.54
USP48-208ENST00000479177 DLX1P56177 255 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 ARF6P62330 175 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 PRB3Q04118 309 aaPredicted RBP5.4□□□□□ -1.54
USP48-208ENST00000479177 SLC9A3R2Q15599 337 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 HCP5Q6MZN7 132 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 C1orf122Q6ZSJ8 110 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 TBC1D26Q86UD7 250 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 SGPP2Q8IWX5 399 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 ODF3L1Q8IXM7 274 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 CMTM1Q8IZ96 169 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 ABHD12Q8N2K0 398 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 ZBTB34Q8NCN2 500 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 OR9G1Q8NH87 305 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 TNFRSF14Q92956 283 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 GALNT14Q96FL9 552 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 ABHD14BQ96IU4 210 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 Q96MF0 132 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 TBX15Q96SF7 602 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 FOXC2Q99958 501 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 ZNF251Q9BRH9 671 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 CLEC7AQ9BXN2 247 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 REG4Q9BYZ8 158 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 SIRT7Q9NRC8 400 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 SDHAF2Q9NX18 166 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms