RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 NACADO15069 1562 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 LOC102725191A0A1B0GVB3 256 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 APOMO95445 188 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 IFNA16P05015 189 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 UCHL3P15374 230 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 HOXA6P31267 233 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 SLCO1A2P46721 670 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 TCL1AP56279 114 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 HOXC5Q00444 222 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 CST6Q15828 149 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 PYDC2Q56P42 97 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 C1orf194Q5T5A4 169 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 C1orf158Q8N1D5 194 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 FNDC9Q8TBE3 224 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 OR52B2Q96RD2 323 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 LRRC19Q9H756 370 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 TRPM3Q9HCF6 1732 aaPredicted RBP2.61□□□□□ -1.99
UPF3B-203ENST00000478840 CACNA1DQ01668 2161 aa2.61□□□□□ -1.99
UPF3B-203ENST00000478840 TMED7-TICAM2A0A0A6YYA0 188 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 A0A1W2PNM2 257 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 OR6C6A6NF89 314 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 SLC17A3O00476 420 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 P0C880 135 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 ESDP10768 282 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 REG1BP48304 166 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 TCF24Q7RTU0 167 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 BAP18Q8IXM2 172 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 LRRC34Q8IZ02 419 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 OR11H1Q8NG94 326 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 GPR119Q8TDV5 335 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 PPP1R14BQ96C90 147 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 LSM5Q9Y4Y9 91 aaKnown RBP2.6□□□□□ -1.99
UPF3B-203ENST00000478840 HEY1Q9Y5J3 304 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 DICER1Q9UPY3 1922 aaKnown RBP2.6□□□□□ -1.99
UPF3B-203ENST00000478840 CHD5Q8TDI0 1954 aa2.6□□□□□ -1.99
UPF3B-203ENST00000478840 SHANK3Q9BYB0 1731 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 C17orf98A8MV24 154 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 CCL1P22362 96 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 CRYBB3P26998 211 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 MARCKSL1P49006 195 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 RAP1GDS1P52306 607 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 MRPS15P82914 257 aaKnown RBP2.59□□□□□ -1.99
UPF3B-203ENST00000478840 HTR4Q13639 388 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 RASL11AQ6T310 242 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 CALHM3Q86XJ0 350 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 OR10D4PQ8NGN7 298 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 LMX1AQ8TE12 382 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 ITFG2Q969R8 447 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 IMP4Q96G21 291 aaKnown RBP2.59□□□□□ -1.99
UPF3B-203ENST00000478840 CCDC42Q96M95 316 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 MND1Q9BWT6 205 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 C16orf95Q9H693 158 aa2.59□□□□□ -1.99
UPF3B-203ENST00000478840 MCTS1Q9ULC4 181 aaKnown RBP2.59□□□□□ -1.99
UPF3B-203ENST00000478840 TMEM210A6NLX4 147 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 C17orf51A8MQB3 221 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 TP53I11O14683 189 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 LY6HO94772 140 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 RPP14O95059 124 aaKnown RBP2.58□□□□□ -2
UPF3B-203ENST00000478840 LYPLA2O95372 231 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 CTXN2P0C2S0 81 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 OR5G3P0C626 314 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 CCL3P10147 92 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 SLC25A16P16260 332 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 FKBP1AP62942 108 aaKnown RBP2.58□□□□□ -2
UPF3B-203ENST00000478840 ZNF117Q03924 483 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 C8orf74Q6P047 294 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 C5orf46Q6UWT4 87 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 DEFB125Q8N687 156 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 OR10A6Q8NH74 314 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 DIRAS2Q96HU8 199 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 CCL13Q99616 98 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 OR51V1Q9H2C8 321 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 FKBP14Q9NWM8 211 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 ZNF391Q9UJN7 358 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 SNX12Q9UMY4 172 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 LCTP09848 1927 aa2.58□□□□□ -2
UPF3B-203ENST00000478840 IGLV10-54A0A075B6I4 117 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 A0A1W2PQL4 384 aaPredicted RBP2.57□□□□□ -2
UPF3B-203ENST00000478840 GRIFINA4D1Z8 144 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 C19orf71A6NCJ1 209 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 NDUFB2O95178 105 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 HLA-DQB2P05538 268 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 RPS17P08708 135 aaKnown RBP2.57□□□□□ -2
UPF3B-203ENST00000478840 CRHBPP24387 322 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 LPAR6P43657 344 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 SULT1A1P50225 295 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 LSM6P62312 80 aaKnown RBP2.57□□□□□ -2
UPF3B-203ENST00000478840 LGALS9BQ3B8N2 356 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 FAM229BQ4G0N7 80 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 SAPCD1Q5SSQ6 148 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 LGALS9CQ6DKI2 356 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 AMTNQ6UX39 209 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 HIST2H3AQ71DI3 136 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 TMEM86BQ8N661 226 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 OR2T27Q8NH04 317 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 MGLLQ99685 303 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 SLC2A9Q9NRM0 540 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 ANAPC10Q9UM13 185 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 SLC22A13Q9Y226 551 aa2.57□□□□□ -2
UPF3B-203ENST00000478840 ZNF337Q9Y3M9 751 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms