RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TLE4Q04727 773 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF146Q15072 292 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 TGIF1Q15583 401 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 MSMO1Q15800 293 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 AWAT1Q58HT5 328 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 AKR1C8PQ5T2L2 129 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 SPSB3Q6PJ21 355 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 C5orf24Q7Z6I8 188 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 C17orf78Q8N4C9 275 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 RNF152Q8N8N0 203 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 SCCPDHQ8NBX0 429 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 OR1J1Q8NGS3 322 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 SLC25A40Q8TBP6 338 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 GPR146Q96CH1 333 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 RBMXL1Q96E39 390 aaKnown RBP4.15□□□□□ -1.75
SF3B6-202ENST00000478050 C14orf79Q96F83 325 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 MAGT1Q9H0U3 335 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 OR51B6Q9H340 312 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 RPS10P5Q9NQ39 176 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 TUBG2Q9NRH3 451 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 KCNIP1Q9NZI2 227 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 TAAR3PQ9P1P4 343 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 CLCF1Q9UBD9 225 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 ERRFI1Q9UJM3 462 aaPredicted RBP4.15□□□□□ -1.75
SF3B6-202ENST00000478050 TRAPPC2LQ9UL33 140 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 RNF150Q9ULK6 438 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 RNF115Q9Y4L5 304 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 WIPI2Q9Y4P8 454 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 WSB1Q9Y6I7 421 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 TANC2Q9HCD6 1990 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 HCFC1P51610 2035 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 TRAV1-1A0A0B4J248 108 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 A0A0G2JRQ6 117 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 TMEM30CPA0ZSE6 113 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 MEX3AA1L020 520 aaKnown RBP4.14□□□□□ -1.75
SF3B6-202ENST00000478050 RBFOX3A6NFN3 312 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 F2RL2O00254 374 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 ZNHIT1O43257 154 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 TNFSF12O43508 249 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 SYNGR2O43760 224 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 RHBDL1O75783 438 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 CST7O76096 145 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 TMEM50AO95807 157 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 OR2H2O95918 312 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 HAND1O96004 215 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 HSPB1P04792 205 aaKnown RBP4.14□□□□□ -1.75
SF3B6-202ENST00000478050 OR8U8P0C7N1 319 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 PSG2P11465 335 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 CBR1P16152 277 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 COX5AP20674 150 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 IGHV1-2P23083 117 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 OMGP23515 440 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 MAS1LP35410 378 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 FHITP49789 147 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 ASCL1P50553 236 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 TNFSF10P50591 281 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 IDH3GP51553 393 aaPredicted RBP4.14□□□□□ -1.75
SF3B6-202ENST00000478050 HBG1P69891 147 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 HBG2P69892 147 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 MZT1Q08AG7 82 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF154Q13106 437 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 ACSF3Q4G176 576 aaPredicted RBP4.14□□□□□ -1.75
SF3B6-202ENST00000478050 AKIRIN2Q53H80 203 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 KHDC3LQ587J8 217 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 C19orf54Q5BKX5 351 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 SOHLH1Q5JUK2 328 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF506Q5JVG8 444 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 SPATA46Q5T0L3 261 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 SLC35E4Q6ICL7 350 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 SLC25A24Q6NUK1 477 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 Q6ZT83 130 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 WDR86Q86TI4 376 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 ODF3L1Q8IXM7 274 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 C1orf174Q8IYL3 243 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF561Q8N587 486 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 TCTEX1D1Q8N7M0 179 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 OR51H1Q8NH63 302 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 SCGB1C1Q8TD33 95 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 TMEM171Q8WVE6 324 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 IL1F10Q8WWZ1 152 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 HIST1H2BAQ96A08 127 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 CLCC1Q96S66 551 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 GPHA2Q96T91 129 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 PSMG3Q9BT73 122 aaPredicted RBP4.14□□□□□ -1.75
SF3B6-202ENST00000478050 PARD6GQ9BYG4 376 aaPredicted RBP4.14□□□□□ -1.75
SF3B6-202ENST00000478050 OR2J1Q9GZK6 312 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 TOLLIPQ9H0E2 274 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 CXXC4Q9H2H0 198 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 HES4Q9HCC6 221 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 COA4Q9NYJ1 87 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 OR1A1Q9P1Q5 309 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 CACNG5Q9UF02 275 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 KCNS2Q9ULS6 477 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 FBXO7Q9Y3I1 522 aa4.14□□□□□ -1.75
SF3B6-202ENST00000478050 RBM7Q9Y580 266 aaKnown RBP4.14□□□□□ -1.75
SF3B6-202ENST00000478050 GTF3C1Q12789 2109 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 BOD1L1Q8NFC6 3051 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 LRBAP50851 2863 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 INTS1Q8N201 2190 aaKnown RBP4.13□□□□□ -1.75
SF3B6-202ENST00000478050 NBEAL1Q6ZS30 2694 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms