RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 C7orf77A4D0Y5 90 aa10.15□□□□□ -0.79
PTPRF-212ENST00000477970 H3BP45 60 aa10.15□□□□□ -0.79
PTPRF-212ENST00000477970 DUTP33316 252 aaKnown RBP10.15□□□□□ -0.79
PTPRF-212ENST00000477970 G6PCP35575 357 aa10.15□□□□□ -0.79
PTPRF-212ENST00000477970 SLC38A11Q08AI6 406 aa10.15□□□□□ -0.79
PTPRF-212ENST00000477970 OR52E5Q8NH55 327 aa10.15□□□□□ -0.79
PTPRF-212ENST00000477970 RXFP4Q8TDU9 374 aa10.15□□□□□ -0.79
PTPRF-212ENST00000477970 LOC102723971A0A1B0GUV8 181 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 LINC00473A8K010 186 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 HPRT1P00492 218 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 SLC25A24Q6NUK1 477 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 LILRB2Q8N423 598 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 CISD1Q9NZ45 108 aaKnown RBP10.14□□□□□ -0.79
PTPRF-212ENST00000477970 DUSP13Q9UII6 198 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 CACNA1BQ00975 2339 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 A0A087WWC5 75 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 MDKP21741 143 aaPredicted RBP10.14□□□□□ -0.79
PTPRF-212ENST00000477970 RAB7AP51149 207 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 SELENOVP59797 346 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 GNB2P62879 340 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 SOHLH1Q5JUK2 328 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 STUMQ69YW2 141 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 H2BFWTQ7Z2G1 175 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF808Q8N4W9 903 aaPredicted RBP10.14□□□□□ -0.79
PTPRF-212ENST00000477970 TAF15Q92804 592 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTPRF-212ENST00000477970 DIRC2Q96SL1 478 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 RARRES2Q99969 163 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 TMEM147Q9BVK8 224 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 JKAMPQ9P055 326 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 MLXQ9UH92 298 aa10.14□□□□□ -0.79
PTPRF-212ENST00000477970 INTS1Q8N201 2190 aaKnown RBP10.14□□□□□ -0.79
PTPRF-212ENST00000477970 SOX15O60248 233 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 MT-ND4LP03901 98 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 CD55P08174 381 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 GPR12P47775 334 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF816Q0VGE8 651 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-212ENST00000477970 SPANXN5Q5MJ07 72 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 MOGAT3Q86VF5 341 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 MALSU1Q96EH3 234 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 OR4C12Q96R67 309 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 P2RX4Q99571 388 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 RNF7Q9UBF6 113 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 PSG11Q9UQ72 335 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 K7EM74 188 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 KRASP01116 189 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 TFF1P04155 84 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 CD40P25942 277 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 HOXA4Q00056 320 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-212ENST00000477970 Q3ZCU0 254 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 TEX36Q5VZQ5 186 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 DTD1Q8TEA8 209 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 SFT2D1Q8WV19 159 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 ITLN1Q8WWA0 313 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 RPS10P5Q9NQ39 176 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF835Q9Y2P0 537 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 MARCH11A6NNE9 402 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 ST8SIA5O15466 376 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 RAB13P51153 203 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 CORO2AQ92828 525 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 IFI27L2Q9H2X8 130 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 RPRMQ9NS64 109 aa10.13□□□□□ -0.79
PTPRF-212ENST00000477970 IGHV1-46P01743 117 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 MBP02144 154 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 TNFSF4P23510 183 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 FAM53AQ6NSI3 398 aaPredicted RBP10.12□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF843Q8N446 348 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 TPRX1Q8N7U7 411 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 DDB2Q92466 427 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 HIST1H2BAQ96A08 127 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 RSG1Q9BU20 258 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 GCM1Q9NP62 436 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 CALYQ9NYX4 217 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 PROP1O75360 226 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 CRYBA1P05813 215 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 BTNL3Q6UXE8 466 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 SLC35E3Q7Z769 313 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 R3HDM4Q96D70 268 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 YPEL4Q96NS1 127 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 CLCC1Q96S66 551 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 CCKARP32238 428 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 TAGLN2P37802 199 aaKnown RBP10.12□□□□□ -0.79
PTPRF-212ENST00000477970 EDDM3AQ14507 147 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF726P1Q15940 193 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 C17orf58Q2M2W7 97 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 SPRNQ5BIV9 151 aa10.12□□□□□ -0.79
PTPRF-212ENST00000477970 DSPP15924 2871 aaKnown RBP10.11□□□□□ -0.79
PTPRF-212ENST00000477970 IGHV3-43A0A0B4J1X8 118 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 ARG1P05089 322 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 IGHV3-43DP0DP04 118 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 PTAFRP25105 342 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 TNFAIP6P98066 277 aaPredicted RBP10.11□□□□□ -0.79
PTPRF-212ENST00000477970 DOLPP1Q86YN1 238 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 RCC1LQ96I51 464 aaKnown RBP10.11□□□□□ -0.79
PTPRF-212ENST00000477970 DCTN5Q9BTE1 182 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 GGACTQ9BVM4 153 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 BIN3Q9NQY0 253 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 GFOD1Q9NXC2 390 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 GNG12Q9UBI6 72 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 GTF3C1Q12789 2109 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 KBTBD11-OT1A0A1B0GTJ5 212 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms