RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 SNX22Q96L94 193 aa7.58□□□□□ -1.2
SMARCB1-206ENST00000477836 C11orf54Q9H0W9 315 aaPredicted RBP7.58□□□□□ -1.2
SMARCB1-206ENST00000477836 HRASLSQ9HDD0 168 aa7.58□□□□□ -1.2
SMARCB1-206ENST00000477836 MCUBQ9NWR8 336 aa7.58□□□□□ -1.2
SMARCB1-206ENST00000477836 ING3Q9NXR8 418 aa7.58□□□□□ -1.2
SMARCB1-206ENST00000477836 ZNF230Q9UIE0 474 aaPredicted RBP7.58□□□□□ -1.2
SMARCB1-206ENST00000477836 TRAPPC2LQ9UL33 140 aa7.58□□□□□ -1.2
SMARCB1-206ENST00000477836 MEIKINA0A087WXM9 373 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 FUOMA2VDF0 154 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 K7N7A8 449 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 M0QYG6 137 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 TK1P04183 234 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 CD74P04233 296 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 RPLP1P05386 114 aaKnown RBP7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 IGHV4-30-4P0DP06 118 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 NAT1P18440 290 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 OR3A3P47888 321 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 EDDM3BP56851 147 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 HLA-DRB3P79483 266 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 PAX5Q02548 391 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 C6orf183Q5T699 404 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 FAAP20Q6NZ36 180 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 Q6ZS49 121 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 GAPTQ8N292 157 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 RPP25LQ8N5L8 163 aaKnown RBP7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 COQ2Q96H96 371 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 Q9N2K0 584 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 KIF25Q9UIL4 384 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 ANXA10Q9UJ72 324 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 MGAT4AQ9UM21 535 aa7.57□□□□□ -1.2
SMARCB1-206ENST00000477836 DYNC1H1Q14204 4646 aaKnown RBP7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 IGHV2-26A0A0B4J1V2 119 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 FAM240BA0A1B0GVZ2 78 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 ODAMA1E959 279 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 DISC1C4P0D8 188 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 M0QZK8 103 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 FABP7O15540 132 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 PMP2P02689 132 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 ZNF728P0DKX0 622 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 HTR1DP28221 377 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 BTCP35070 178 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 GLP1RP43220 463 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 RFX2P48378 723 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 AESQ08117 197 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 OXA1LQ15070 435 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 CDK10Q15131 360 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 TEX38Q6PEX7 206 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 TRAT1Q6PIZ9 186 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 NRARPQ7Z6K4 114 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 ZNF429Q86V71 674 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 CENPSQ8N2Z9 138 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 ARRDC1Q8N5I2 433 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 OR5AP2Q8NGF4 316 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 OR4D10Q8NGI6 311 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 OR56B4Q8NH76 319 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 CCDC107Q8WV48 283 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 PRRT1Q99946 306 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 TINAGL1Q9GZM7 467 aaPredicted RBP7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 EHFQ9NZC4 300 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 KCNIP1Q9NZI2 227 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 COPZ2Q9P299 210 aa7.56□□□□□ -1.2
SMARCB1-206ENST00000477836 IGKV1D-8A0A087WSZ0 117 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 TRGV10A0A0A0MS01 117 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 TRDCB7Z8K6 153 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 SAP30O75446 220 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 RBP4P02753 201 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 RCC1P18754 421 aaPredicted RBP7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 ERP29P30040 261 aaKnown RBP7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 CDX1P47902 265 aaPredicted RBP7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 GLIPR1P48060 266 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 ARHGDIBP52566 201 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 FHL3Q13643 280 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 SCGB2B2Q4G0G5 96 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 ZNF880Q6PDB4 577 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 PLET1Q6UQ28 207 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 ZNF554Q86TJ5 538 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 TMEM17Q86X19 198 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 DRAM1Q8N682 238 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 TPRX1Q8N7U7 411 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 OR11H1Q8NG94 326 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 OR51S1Q8NGJ8 323 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 OR4P4Q8NGL7 312 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 OR4A4PQ8NGN8 299 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 ST6GALNAC6Q969X2 333 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 MBNL3Q9NUK0 354 aaKnown RBP7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 C19orf73Q9NVV2 129 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 SLC2A8Q9NY64 477 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 OR6C3Q9NZP0 311 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 SCP2D1Q9UJQ7 156 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 MOB4Q9Y3A3 225 aa7.55□□□□□ -1.2
SMARCB1-206ENST00000477836 TRAV39A0A0B4J263 110 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 NDUFB6O95139 128 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 OR5H8P0DN80 308 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 CCR6P51684 374 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 TSPAN5P62079 268 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 RBMS2Q15434 407 aaKnown RBP7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 HMGN3Q15651 99 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 HAGHQ16775 308 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 CXorf66Q5JRM2 361 aaPredicted RBP7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 IDO2Q6ZQW0 420 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms