RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 Q8N2B8 174 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 OR52L2PQ8NGH6 319 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 OR51S1Q8NGJ8 323 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 OR52M1Q8NGK5 317 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 MRPL30Q8TCC3 161 aaKnown RBP6.6□□□□□ -1.35
HDAC6-221ENST00000477561 CFHR4Q92496 578 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 AKR1E2Q96JD6 320 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 SCGB3A2Q96PL1 93 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 GINS4Q9BRT9 223 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 HDHD3Q9BSH5 251 aaPredicted RBP6.6□□□□□ -1.35
HDAC6-221ENST00000477561 TINAGL1Q9GZM7 467 aaPredicted RBP6.6□□□□□ -1.35
HDAC6-221ENST00000477561 C20orf85Q9H1P6 137 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 NUDT15Q9NV35 164 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 NECAP2Q9NVZ3 263 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 ZNF230Q9UIE0 474 aaPredicted RBP6.6□□□□□ -1.35
HDAC6-221ENST00000477561 TRAV6A0A075B6T7 132 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 IGHV1-3A0A0C4DH29 117 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 FAM90A9PA6NNJ1 464 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 PRAF2O60831 178 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 PFDN1O60925 122 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 FBXO24O75426 580 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 IGKV1D-33P01593 117 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 IGKV1-33P01594 117 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 GAPDHP04406 335 aaKnown RBP6.59□□□□□ -1.35
HDAC6-221ENST00000477561 CTXN2P0C2S0 81 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 ZNF735P0CB33 412 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 TMEM11P17152 192 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 BCAP31P51572 246 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 GNMTQ14749 295 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 CDK10Q15131 360 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 C2orf68Q2NKX9 166 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 CT45A1Q5HYN5 189 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 OVCH2Q7RTZ1 564 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 C16orf82Q7Z2V1 217 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 ZNF439Q8NDP4 499 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 OR5AU1Q8NGC0 362 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 OR4D10Q8NGI6 311 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 CT45A3Q8NHU0 189 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 MAFIPQ8WZ33 124 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 Q9N2K0 584 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 OR2S2Q9NQN1 319 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 EHFQ9NZC4 300 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 KCNIP1Q9NZI2 227 aa6.59□□□□□ -1.35
HDAC6-221ENST00000477561 A0A1W2PRX2 142 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 TRDCB7Z8K6 153 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 ARPC1BO15143 372 aaKnown RBP6.58□□□□□ -1.36
HDAC6-221ENST00000477561 FABP7O15540 132 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 KCNAB3O43448 404 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 PPP1CCP36873 323 aaKnown RBP6.58□□□□□ -1.36
HDAC6-221ENST00000477561 DEFA6Q01524 100 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 ZNF816Q0VGE8 651 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-221ENST00000477561 SURF2Q15527 256 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-221ENST00000477561 TATDN3Q17R31 274 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 MORN2Q502X0 79 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 ZNF880Q6PDB4 577 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 TRAT1Q6PIZ9 186 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 C10orf99Q6UWK7 81 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 SLC25A48Q6ZT89 311 aaKnown RBP6.58□□□□□ -1.36
HDAC6-221ENST00000477561 CENPVQ7Z7K6 275 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-221ENST00000477561 THNSL2Q86YJ6 484 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 C1QL4Q86Z23 238 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 OR8H3Q8N146 312 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 LINC00311Q8N616 119 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 OR6F1Q8NGZ6 308 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 TERB2Q8NHR7 220 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 WIPF2Q8TF74 440 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-221ENST00000477561 RTN4IP1Q8WWV3 396 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-221ENST00000477561 IL1F10Q8WWZ1 152 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 CITED2Q99967 270 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-221ENST00000477561 WNT10AQ9GZT5 417 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 GPN1Q9HCN4 374 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-221ENST00000477561 RAB9BQ9NP90 201 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 MBNL3Q9NUK0 354 aaKnown RBP6.58□□□□□ -1.36
HDAC6-221ENST00000477561 MOB4Q9Y3A3 225 aa6.58□□□□□ -1.36
HDAC6-221ENST00000477561 TET2Q6N021 2002 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-221ENST00000477561 IGKV1D-8A0A087WSZ0 117 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 NCBP2LA6PVI3 153 aaKnown RBP6.57□□□□□ -1.36
HDAC6-221ENST00000477561 WIPF1O43516 503 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 DIRAS3O95661 229 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 RLN1P04808 185 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 IL5P05113 134 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 GSTT2P0CG29 244 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 TRAPPC2P0DI81 140 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 TRAPPC2BP0DI82 140 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 OR5H8P0DN80 308 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 IL3RAP26951 378 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 MECP2P51608 486 aaKnown RBP6.57□□□□□ -1.36
HDAC6-221ENST00000477561 TAS2R31P59538 309 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 HLA-DRB3P79483 266 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 DHRS11Q6UWP2 260 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 Q6ZPA2 131 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 ZNF554Q86TJ5 538 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 TGIF2LXQ8IUE1 241 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 C5orf56Q8N8D9 126 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 C8orf31Q8N9H6 132 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 OR4A4PQ8NGN8 299 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 OR13C8Q8NGS7 320 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 CHAC2Q8WUX2 184 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 ST6GALNAC6Q969X2 333 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 GALMQ96C23 342 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms