RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 MMD2Q8IY49 270 aa16■□□□□ 0.15
VARS2-209ENST00000477288 H1FOOQ8IZA3 346 aaPredicted RBP16■□□□□ 0.15
VARS2-209ENST00000477288 A0A0U1RQV5 110 aa16■□□□□ 0.15
VARS2-209ENST00000477288 IFNL4K9M1U5 179 aa16■□□□□ 0.15
VARS2-209ENST00000477288 CIRBPQ14011 172 aaKnown RBP16■□□□□ 0.15
VARS2-209ENST00000477288 MIC13Q5XKP0 118 aa16■□□□□ 0.15
VARS2-209ENST00000477288 SGK494Q96LW2 274 aa16■□□□□ 0.15
VARS2-209ENST00000477288 FXYD3Q14802 87 aa16■□□□□ 0.15
VARS2-209ENST00000477288 ZIC3O60481 467 aa16■□□□□ 0.15
VARS2-209ENST00000477288 ZNF250P15622 560 aa16■□□□□ 0.15
VARS2-209ENST00000477288 PQLC2Q6ZP29 291 aa16■□□□□ 0.15
VARS2-209ENST00000477288 BEX4Q9NWD9 120 aaPredicted RBP16■□□□□ 0.15
VARS2-209ENST00000477288 FABP2P12104 132 aa15.99■□□□□ 0.15
VARS2-209ENST00000477288 COL25A1Q9BXS0 654 aaPredicted RBP15.99■□□□□ 0.15
VARS2-209ENST00000477288 GAGE10A6NGK3 116 aa15.99■□□□□ 0.15
VARS2-209ENST00000477288 SAP25Q8TEE9 199 aa15.99■□□□□ 0.15
VARS2-209ENST00000477288 CHRNA10Q9GZZ6 450 aa15.99■□□□□ 0.15
VARS2-209ENST00000477288 ZNF430Q9H8G1 570 aaPredicted RBP15.99■□□□□ 0.15
VARS2-209ENST00000477288 LINC01560Q8TB33 94 aa15.99■□□□□ 0.15
VARS2-209ENST00000477288 ST6GALNAC2Q9UJ37 374 aa15.99■□□□□ 0.15
VARS2-209ENST00000477288 PSMB11A5LHX3 300 aa15.99■□□□□ 0.15
VARS2-209ENST00000477288 NDUFA2O43678 99 aa15.99■□□□□ 0.15
VARS2-209ENST00000477288 TSPAN2O60636 221 aa15.99■□□□□ 0.15
VARS2-209ENST00000477288 DXOO77932 396 aaKnown RBP15.99■□□□□ 0.15
VARS2-209ENST00000477288 ASAH2BP0C7U1 165 aa15.99■□□□□ 0.15
VARS2-209ENST00000477288 TMEM177Q53S58 311 aa15.99■□□□□ 0.15
VARS2-209ENST00000477288 NUP214P35658 2090 aaPredicted RBP15.98■□□□□ 0.15
VARS2-209ENST00000477288 ABHD12Q8N2K0 398 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 OR5AC2Q9NZP5 309 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 C7orf71A4D174 169 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 LMX1BO60663 402 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 NANOS3P60323 173 aaKnown RBP15.98■□□□□ 0.15
VARS2-209ENST00000477288 PSG9Q00887 426 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 PTP4A3O75365 173 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 CACNG7P62955 275 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 RFLNBQ8N5W9 214 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 GEMIN7Q9H840 131 aaKnown RBP15.98■□□□□ 0.15
VARS2-209ENST00000477288 CALYQ9NYX4 217 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 CCL27Q9Y4X3 112 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 H0Y980 276 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 SRSF12Q8WXF0 261 aaKnown RBP15.98■□□□□ 0.15
VARS2-209ENST00000477288 NPFFO15130 113 aa15.98■□□□□ 0.15
VARS2-209ENST00000477288 COL11A2P13942 1736 aaPredicted RBP15.97■□□□□ 0.15
VARS2-209ENST00000477288 SEC16AO15027 2179 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 CABIN1Q9Y6J0 2220 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 PLP1P60201 277 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 MBNL2Q5VZF2 373 aaKnown RBP15.97■□□□□ 0.15
VARS2-209ENST00000477288 TMEM91Q6ZNR0 172 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 GALNT14Q96FL9 552 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 SMIM6P0DI80 62 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 PRDM6Q9NQX0 595 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 DSPPQ9NZW4 1301 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 IGHV3-35A0A0C4DH35 117 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 NGFRP08138 427 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 STARD6P59095 220 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 EIF4EBP2Q13542 120 aaPredicted RBP15.97■□□□□ 0.15
VARS2-209ENST00000477288 TNFSF18Q9UNG2 199 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 LY75O60449 1722 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 GDF9O60383 454 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 C10orf111Q8N326 155 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 IGHV1-69-2A0A0G2JMI3 117 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 SERF2P84101 59 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 ABLIM2Q6H8Q1 611 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 LINC00469Q8N7U9 141 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 WNT5BQ9H1J7 359 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 KCNK7Q9Y2U2 307 aa15.97■□□□□ 0.15
VARS2-209ENST00000477288 S1PR2O95136 353 aa15.96■□□□□ 0.15
VARS2-209ENST00000477288 TUBA4BQ9H853 241 aa15.96■□□□□ 0.15
VARS2-209ENST00000477288 A0A1W2PP11 408 aa15.96■□□□□ 0.15
VARS2-209ENST00000477288 EIF3GO75821 320 aaKnown RBP eCLIP15.96■□□□□ 0.15
VARS2-209ENST00000477288 DCAF12L2Q5VW00 463 aa15.96■□□□□ 0.15
VARS2-209ENST00000477288 GPHA2Q96T91 129 aa15.96■□□□□ 0.15
VARS2-209ENST00000477288 HS3ST3B1Q9Y662 390 aa15.96■□□□□ 0.15
VARS2-209ENST00000477288 SELENOTP62341 195 aa15.96■□□□□ 0.15
VARS2-209ENST00000477288 CXorf66Q5JRM2 361 aaPredicted RBP15.96■□□□□ 0.15
VARS2-209ENST00000477288 FAM131CQ96AQ9 280 aa15.96■□□□□ 0.14
VARS2-209ENST00000477288 TRPM6Q9BX84 2022 aa15.96■□□□□ 0.14
VARS2-209ENST00000477288 A0A1W2PPC1 479 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 SUMO2P61956 95 aaKnown RBP15.95■□□□□ 0.14
VARS2-209ENST00000477288 UNC119Q13432 240 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 PNKDQ8N490 385 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 SFXN3Q9BWM7 321 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 AMY1AP04745 511 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 MRPS16Q9Y3D3 137 aaKnown RBP15.95■□□□□ 0.14
VARS2-209ENST00000477288 ODAMA1E959 279 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 KLK2P20151 261 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 LEPROTL1O95214 131 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 SNAI3Q3KNW1 292 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 KLF14Q8TD94 323 aaPredicted RBP15.95■□□□□ 0.14
VARS2-209ENST00000477288 PLA2G10O15496 165 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 IGHV3-48P01763 117 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 IGHV3-23P01764 117 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 COX6A1P12074 109 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 RHOVQ96L33 236 aa15.95■□□□□ 0.14
VARS2-209ENST00000477288 MRPL18Q9H0U6 180 aaKnown RBP15.95■□□□□ 0.14
VARS2-209ENST00000477288 IGKV1-8A0A0C4DH67 115 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 EPOPA6NHQ4 379 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 C9JCJ5 164 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 RAB9AP51151 201 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 MUC1P15941 1255 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms