RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 RCL1Q9Y2P8 373 aaKnown RBP3.52□□□□□ -1.85
CD55-208ENST00000476590 ZNF257Q9Y2Q1 563 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 LSM5Q9Y4Y9 91 aaKnown RBP3.52□□□□□ -1.85
CD55-208ENST00000476590 LINC00312Q9Y6C7 94 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 LCTP09848 1927 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 TRAV9-1A0A075B6T8 112 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 KIR2DS1A0A191URI9 304 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 ZC3H12DA2A288 527 aaKnown RBP3.52□□□□□ -1.85
CD55-208ENST00000476590 CEACAM18A8MTB9 384 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 ZNF732B4DXR9 585 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 RER1O15258 196 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 TMPRSS2O15393 492 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 SYNGR3O43761 229 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 ZNF324O75467 553 aaPredicted RBP3.52□□□□□ -1.85
CD55-208ENST00000476590 FCN3O75636 299 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 IGHG3P01860 377 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 ISG15P05161 165 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 MRPL3P09001 348 aaKnown RBP3.52□□□□□ -1.85
CD55-208ENST00000476590 NHLRC4P0CG21 123 aaPredicted RBP3.52□□□□□ -1.85
CD55-208ENST00000476590 HIST1H1DP16402 221 aaKnown RBP3.52□□□□□ -1.85
CD55-208ENST00000476590 CRYBB3P26998 211 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 GPR183P32249 361 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 REG1BP48304 166 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 SEC61GP60059 68 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 ATP5G2Q06055 141 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 FMODQ06828 376 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 KIR2DS1Q14954 304 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 OR10J3Q5JRS4 329 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 FAM78AQ5JUQ0 283 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 TIMM23BQ5SRD1 257 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 RNASEKQ6P5S7 137 aaKnown RBP3.52□□□□□ -1.85
CD55-208ENST00000476590 SHISA6Q6ZSJ9 500 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 Q6ZUT4 128 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 ZNF627Q7L945 461 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 DEFB106AQ8N104 65 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 LRRC75A-AS1Q8N1F1 130 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 TEX29Q8N6K0 151 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 LINC01555Q8NAE3 123 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 ZNF439Q8NDP4 499 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 SGMS2Q8NHU3 365 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 PLPPR1Q8TBJ4 325 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 FGF13Q92913 245 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 EMG1Q92979 244 aaKnown RBP3.52□□□□□ -1.85
CD55-208ENST00000476590 TMEM54Q969K7 222 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 TMEM230Q96A57 120 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 ZG16BQ96DA0 208 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 DNAJA3Q96EY1 480 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 PDCD1LG2Q9BQ51 273 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 NAA38Q9BRA0 125 aaKnown RBP3.52□□□□□ -1.85
CD55-208ENST00000476590 SLC25A33Q9BSK2 321 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 VN1R3Q9BXE9 311 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 ENY2Q9NPA8 101 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 C20orf141Q9NUB4 165 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 DNAJB12Q9NXW2 375 aaKnown RBP3.52□□□□□ -1.85
CD55-208ENST00000476590 SIGLEC8Q9NYZ4 499 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 KLK13Q9UKR3 277 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 OARD1Q9Y530 152 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 KCNE3Q9Y6H6 103 aa3.52□□□□□ -1.85
CD55-208ENST00000476590 THSD7BQ9C0I4 1608 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 DOCK6Q96HP0 2047 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 A0A087WV48 116 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 TRGV10A0A0A0MS01 117 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 NSG1A0A0A6YYJ2 146 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.51□□□□□ -1.85
CD55-208ENST00000476590 LRRC3CA6NJW4 275 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 SHISA7A6NL88 538 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 ZFP92A6NM28 416 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 FAM72CH0Y354 149 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 C15orf65H3BRN8 121 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 CCDC179H3BU77 68 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 M0QZQ0 153 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 MT-ATP8P03928 68 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 CRYGBP07316 175 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 PMCHP20382 165 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 NTF3P20783 257 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 HIST1H1TP22492 207 aaPredicted RBP3.51□□□□□ -1.85
CD55-208ENST00000476590 HTR1DP28221 377 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 DRD3P35462 400 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 GLRXP35754 106 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 FUT6P51993 359 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 ZNF133P52736 654 aaPredicted RBP3.51□□□□□ -1.85
CD55-208ENST00000476590 CCL23P55773 120 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 ZNF121P58317 390 aaPredicted RBP3.51□□□□□ -1.85
CD55-208ENST00000476590 ZNF117Q03924 483 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 HSPB3Q12988 150 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 PSG5Q15238 335 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 SAMD5Q5TGI4 173 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 FAM72AQ5TYM5 149 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 EEF1DP3Q658K8 133 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 PMS2CLQ68D20 193 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 HIST2H2BCQ6DN03 193 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 HIST2H2BDQ6DRA6 164 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 FAM72DQ6L9T8 149 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 DHRS13Q6UX07 377 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 C17orf99Q6UX52 265 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 SPATA12Q7Z6I5 190 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 FAM72BQ86X60 149 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 GCSAMQ8N6F7 178 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 OR2M3Q8NG83 312 aa3.51□□□□□ -1.85
CD55-208ENST00000476590 OR5AN1Q8NGI8 311 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms