RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 HINT1P49773 126 aaPredicted RBP7.1□□□□□ -1.27
VAPB-205ENST00000476395 TAS2R30P59541 319 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 SPIN3Q5JUX0 258 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 COL5A1-AS1Q5SY13 56 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 C20orf204Q6ZNR8 217 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 OR2T10Q8NGZ9 312 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 OR5B12Q96R08 314 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 DERL1Q9BUN8 251 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 TMEM106BQ9NUM4 274 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 NECAP2Q9NVZ3 263 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 SIT1Q9Y3P8 196 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 DCHS1Q96JQ0 3298 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 DMXL1Q9Y485 3027 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 CLEC18AA5D8T8 446 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 NKX6-3A6NJ46 265 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 HERV-K104P63124 156 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 RNPS1Q15287 305 aaKnown RBP7.1□□□□□ -1.27
VAPB-205ENST00000476395 TMEM241Q24JQ0 296 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 ALKBH6Q3KRA9 238 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 NMSQ5H8A3 153 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 CLEC18CQ8NCF0 446 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 CLDN23Q96B33 292 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 SPSB1Q96BD6 273 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 TMEM56Q96MV1 263 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 ATP5SQ99766 215 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 ALKBH7Q9BT30 221 aaPredicted RBP7.1□□□□□ -1.27
VAPB-205ENST00000476395 SLC25A22Q9H936 323 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 ZNF286AQ9HBT8 521 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 TMEM38BQ9NVV0 291 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 TRAPPC1Q9Y5R8 145 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 TMEM56-RWDD3S4R434 201 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 EP300Q09472 2414 aaPredicted RBP7.1□□□□□ -1.27
VAPB-205ENST00000476395 C3orf85A0A1B0GTC6 90 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 C19orf67A6NJJ6 358 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 ZNF737O75373 536 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 CRYAAP02489 173 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 PPBPP02775 128 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 SELENOTP62341 195 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 ZNF818PQ6ZRF7 136 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 ZNF114Q8NC26 417 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 OR8G5Q8NG78 346 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 OR10W1Q8NGF6 305 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 SAP25Q8TEE9 199 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 SPSB4Q96A44 273 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 VAMP8Q9BV40 100 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 OR51I2Q9H344 312 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 PLEK2Q9NYT0 353 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 TAAR3PQ9P1P4 343 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 NAT8Q9UHE5 227 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 CACNA1HO95180 2353 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 SS18L1O75177 396 aaPredicted RBP7.09□□□□□ -1.27
VAPB-205ENST00000476395 SERF1AO75920 110 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 NAPSAO96009 420 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 C1QTNF9P0C862 333 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 CCL2P13500 99 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 ZNF32P17041 273 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 RBM11P57052 281 aaKnown RBP7.09□□□□□ -1.27
VAPB-205ENST00000476395 RPL15P61313 204 aaKnown RBP7.09□□□□□ -1.27
VAPB-205ENST00000476395 TEX43Q6ZNM6 134 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 COLCA1Q6ZS62 124 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 TBC1D26Q86UD7 250 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 OR1F12Q8NHA8 337 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 CMTM2Q8TAZ6 248 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 ABHD3Q8WU67 409 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 SMIM12Q96EX1 92 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 TMEM204Q9BSN7 226 aa7.09□□□□□ -1.27
VAPB-205ENST00000476395 UBE2J1Q9Y385 318 aaPredicted RBP7.09□□□□□ -1.27
VAPB-205ENST00000476395 MAP1LC3B2A6NCE7 125 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 HELTA6NFD8 242 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 TRDCB7Z8K6 153 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 HBE1P02100 147 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 B4GALT1P15291 398 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 CBLN1P23435 193 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 NPPCP23582 126 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 FFAR4Q5NUL3 377 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 Q6ZS49 121 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 CYP2G1PQ6ZSU1 146 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 ZNF695Q8IW36 515 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 ZDHHC23Q8IYP9 409 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 C20orf144Q9BQM9 153 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 MAP1LC3BQ9GZQ8 125 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 TMEM222Q9H0R3 208 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 FBXL7Q9UJT9 491 aa7.09□□□□□ -1.28
VAPB-205ENST00000476395 PINLYPA6NC86 204 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 HSPB6O14558 160 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 MPPED1O15442 326 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 PPYP01298 95 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 GYPAP02724 150 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 DSCR4P56555 118 aaPredicted RBP7.08□□□□□ -1.28
VAPB-205ENST00000476395 KRTDAPP60985 99 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 RPS18P62269 152 aaKnown RBP7.08□□□□□ -1.28
VAPB-205ENST00000476395 TMEM41BQ5BJD5 291 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 OR8G2PQ6IF36 304 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 HAPLN4Q86UW8 402 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 H1FOOQ8IZA3 346 aaPredicted RBP7.08□□□□□ -1.28
VAPB-205ENST00000476395 OSR2Q8N2R0 312 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 RPP25LQ8N5L8 163 aaKnown RBP7.08□□□□□ -1.28
VAPB-205ENST00000476395 OR4F5Q8NH21 305 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 GNPNAT1Q96EK6 184 aaPredicted RBP7.08□□□□□ -1.28
VAPB-205ENST00000476395 BTF3L4Q96K17 158 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms