RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 A0A087WWC5 75 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 PIGBOS1A0A0B4J2F0 54 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 KIAA1324LA8MWY0 1029 aaPredicted RBP13.4□□□□□ -0.26
VARS2-207ENST00000476162 SLC35E4Q6ICL7 350 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 DTD1Q8TEA8 209 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 GALMQ96C23 342 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 COQ2Q96H96 371 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 ACTR3CQ9C0K3 210 aaPredicted RBP13.4□□□□□ -0.26
VARS2-207ENST00000476162 CACNG5Q9UF02 275 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 METRNQ9UJH8 293 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 FBXO7Q9Y3I1 522 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 FAM215AQ9Y5M1 114 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 IGKV1-5P01602 117 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 SLC25A6P12236 298 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 ATP6V0CP27449 155 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 ZNF83P51522 516 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 GAGE1Q13065 139 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 SOHLH1Q5JUK2 328 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 ZNF474Q6S9Z5 364 aaPredicted RBP13.4□□□□□ -0.26
VARS2-207ENST00000476162 RNASEH2CQ8TDP1 164 aaKnown RBP13.4□□□□□ -0.26
VARS2-207ENST00000476162 FRZBQ92765 325 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 TMEM208Q9BTX3 173 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 LIN7CQ9NUP9 197 aaKnown RBP13.4□□□□□ -0.26
VARS2-207ENST00000476162 RNF150Q9ULK6 438 aa13.4□□□□□ -0.26
VARS2-207ENST00000476162 STRAPQ9Y3F4 350 aaKnown RBP13.4□□□□□ -0.26
VARS2-207ENST00000476162 TGIF2-C20orf24A0A0A6YYL0 155 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 H3BP45 60 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 KLK10O43240 276 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 SOX15O60248 233 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 GABRA2P47869 451 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 BAXQ07812 192 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 MSMPQ1L6U9 139 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 OR2Z1Q8NG97 314 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 OR52L2PQ8NGH6 319 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 OR2G3Q8NGZ4 309 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 PRR7Q8TB68 274 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 FAM213BQ8TBF2 198 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 LSM10Q969L4 123 aaKnown RBP13.39□□□□□ -0.27
VARS2-207ENST00000476162 DUSP13Q9UII6 198 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 CACNA1DQ01668 2161 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 AKAP13Q12802 2813 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 OOEPA6NGQ2 149 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 CYB5BO43169 146 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 HBZP02008 142 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 LINC00614P0C842 121 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 COL10A1Q03692 680 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 LRP11Q86VZ4 500 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 ZNF295-AS1Q8N0V1 137 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 TPRX1Q8N7U7 411 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 RBMXL3Q8N7X1 1067 aaKnown RBP13.39□□□□□ -0.27
VARS2-207ENST00000476162 FAM169BQ8N8A8 192 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 MRGPRDQ8TDS7 321 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 PBDC1Q9BVG4 233 aa13.39□□□□□ -0.27
VARS2-207ENST00000476162 A0A1B0GW64 132 aa13.38□□□□□ -0.27
VARS2-207ENST00000476162 K7N7A8 449 aa13.38□□□□□ -0.27
VARS2-207ENST00000476162 GLIPR1P48060 266 aa13.38□□□□□ -0.27
VARS2-207ENST00000476162 TDGF1P3P51864 188 aa13.38□□□□□ -0.27
VARS2-207ENST00000476162 SMIM21Q3B7S5 101 aa13.38□□□□□ -0.27
VARS2-207ENST00000476162 SPOCK3Q9BQ16 436 aa13.38□□□□□ -0.27
VARS2-207ENST00000476162 A0A1B0GV50 99 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 M0R1B8 84 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 NPSP0C0P6 89 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 TAGLN2P37802 199 aaKnown RBP13.37□□□□□ -0.27
VARS2-207ENST00000476162 GNG10P50151 68 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 C1orf174Q8IYL3 243 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 ZNF645Q8N7E2 425 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 LRRC29Q8WV35 223 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 RAB39BQ96DA2 213 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 OR2D2Q9H210 308 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 URGCP-MRPS24S4R325 110 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 M0R143 59 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 RPL23AP62750 156 aaKnown RBP13.37□□□□□ -0.27
VARS2-207ENST00000476162 RAB40CQ96S21 281 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 ABHD14AQ9BUJ0 271 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 SMDT1Q9H4I9 107 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 CADP27708 2225 aa13.37□□□□□ -0.27
VARS2-207ENST00000476162 H3BQ15 152 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 IFNL4K9M1U5 179 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 SSTR5P35346 364 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 BPIFB3P59826 476 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 MRPS11P82912 194 aaKnown RBP13.36□□□□□ -0.27
VARS2-207ENST00000476162 RUNX1Q01196 453 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 TMEM267Q0VDI3 215 aaPredicted RBP13.36□□□□□ -0.27
VARS2-207ENST00000476162 TIMM23BQ5SRD1 257 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 C1orf185Q5T7R7 199 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 ZNF808Q8N4W9 903 aaPredicted RBP13.36□□□□□ -0.27
VARS2-207ENST00000476162 CD177Q8N6Q3 437 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 RCC1LQ96I51 464 aaKnown RBP13.36□□□□□ -0.27
VARS2-207ENST00000476162 CEP250Q9BV73 2442 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 SYNGR2O43760 224 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 METTL15P1P0C7V9 234 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 IAPPP10997 89 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 PPP1CCP36873 323 aaKnown RBP13.36□□□□□ -0.27
VARS2-207ENST00000476162 FGFRL1Q8N441 504 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 OR13A1Q8NGR1 328 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 C5orf30Q96GV9 206 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 PITPNC1Q9UKF7 332 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 WSB1Q9Y6I7 421 aa13.36□□□□□ -0.27
VARS2-207ENST00000476162 RNF212BA8MTL3 300 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 RAMP3O60896 148 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms