RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 S100GP29377 79 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 LPAR6P43657 344 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 RAB7AP51149 207 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 TMEM33P57088 247 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 TLE4Q04727 773 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 LTC4SQ16873 150 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 MIDNQ504T8 468 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 CXorf66Q5JRM2 361 aaPredicted RBP7.9□□□□□ -1.14
ITGA6-210ENST00000475302 AVPI1Q5T686 147 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 PRAMEF5Q5TYX0 476 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 BTNL3Q6UXE8 466 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 ZNF767PQ75MW2 155 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 LEAP2Q969E1 77 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 ZNF714Q96N38 554 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 ABHD14AQ9BUJ0 271 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 CHODLQ9H9P2 273 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 LIN7CQ9NUP9 197 aaKnown RBP7.9□□□□□ -1.14
ITGA6-210ENST00000475302 COA4Q9NYJ1 87 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 RALYQ9UKM9 306 aaKnown RBP7.9□□□□□ -1.14
ITGA6-210ENST00000475302 KCNS2Q9ULS6 477 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 POMT1Q9Y6A1 747 aa7.9□□□□□ -1.14
ITGA6-210ENST00000475302 ADGRG4Q8IZF6 3080 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 ABCA4P78363 2273 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 SAA2-SAA4A0A096LPE2 208 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 A0A1W2PPE3 182 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 H3BS24 57 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 ST8SIA3O43173 380 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 BCL2L11O43521 198 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 TMEM50AO95807 157 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 SERPINE2P07093 398 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 SAA2P0DJI9 122 aaPredicted RBP7.89□□□□□ -1.15
ITGA6-210ENST00000475302 GPR12P47775 334 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 EFNA4P52798 201 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 PAX9P55771 341 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 AARDQ4LEZ3 155 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 RPL39P5Q59GN2 51 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 WDR25Q64LD2 544 aaPredicted RBP7.89□□□□□ -1.15
ITGA6-210ENST00000475302 ZNF833PQ6ZTB9 187 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 ST6GALNAC6Q969X2 333 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 ARL6Q9H0F7 186 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 GAL3ST2Q9H3Q3 398 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 ZFP57Q9NU63 452 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 MIOXQ9UGB7 285 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 PAIP2BQ9ULR5 123 aaKnown RBP7.89□□□□□ -1.15
ITGA6-210ENST00000475302 RBM7Q9Y580 266 aaKnown RBP7.89□□□□□ -1.15
ITGA6-210ENST00000475302 MMP24Q9Y5R2 645 aa7.89□□□□□ -1.15
ITGA6-210ENST00000475302 HRNRQ86YZ3 2850 aaPredicted RBP7.89□□□□□ -1.15
ITGA6-210ENST00000475302 RPS10-NUDT3A0A1W2PQS6 291 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 IGHV3-7P01780 117 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 RBP4P02753 201 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 IL6RP08887 468 aaPredicted RBP7.88□□□□□ -1.15
ITGA6-210ENST00000475302 CT45A6P0DMU7 189 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 CT45A5P0DMU8 189 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 CT45A7P0DMV0 189 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 MMP9P14780 707 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 C4BPBP20851 252 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 CDKN1AP38936 164 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 ZNF137PP52743 207 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 CATR1Q13166 79 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 EXOSC2Q13868 293 aaKnown RBP7.88□□□□□ -1.15
ITGA6-210ENST00000475302 IZUMO4Q1ZYL8 232 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 SPAG16Q8N0X2 631 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 ZNF383Q8NA42 475 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 DCUN1D4Q92564 292 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 RAB1CQ92928 201 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 NEIL1Q96FI4 390 aaPredicted RBP7.88□□□□□ -1.15
ITGA6-210ENST00000475302 BSCL2Q96G97 398 aaPredicted RBP7.88□□□□□ -1.15
ITGA6-210ENST00000475302 SPIN2AQ99865 258 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 SPIN2BQ9BPZ2 258 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 UBTD1Q9HAC8 227 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 PLEKHA2Q9HB19 425 aa7.88□□□□□ -1.15
ITGA6-210ENST00000475302 PATZ1Q9HBE1 687 aaKnown RBP7.88□□□□□ -1.15
ITGA6-210ENST00000475302 C22orf46C9J442 243 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 E5RGE8 158 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 RAB29O14966 203 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 TSC22D2O75157 780 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 S1PR2O95136 353 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 PET100P0DJ07 73 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 IGHV1-8P0DP01 117 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 NKX2-1P43699 371 aaPredicted RBP7.87□□□□□ -1.15
ITGA6-210ENST00000475302 P2RY1P47900 373 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 POLR2GP62487 172 aaKnown RBP eCLIP7.87□□□□□ -1.15
ITGA6-210ENST00000475302 PAX2Q02962 417 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 SMCO1Q147U7 214 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 POU2AF1Q16633 256 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 SLC51BQ86UW2 128 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 INO80EQ8NBZ0 244 aaPredicted RBP7.87□□□□□ -1.15
ITGA6-210ENST00000475302 OR8H1Q8NGG4 311 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 STOML3Q8TAV4 291 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 TCTEX1D2Q8WW35 142 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 ZNRD1Q9P1U0 126 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 NSG2Q9Y328 171 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 DOPEY1Q5JWR5 2465 aa7.87□□□□□ -1.15
ITGA6-210ENST00000475302 J3QR06 171 aa7.86□□□□□ -1.15
ITGA6-210ENST00000475302 M0R1X1 148 aa7.86□□□□□ -1.15
ITGA6-210ENST00000475302 PPIHO43447 177 aaKnown RBP7.86□□□□□ -1.15
ITGA6-210ENST00000475302 HPRT1P00492 218 aa7.86□□□□□ -1.15
ITGA6-210ENST00000475302 IGLV1-47P01700 117 aa7.86□□□□□ -1.15
ITGA6-210ENST00000475302 IGHV4-39P01824 125 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms