RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 SLC31A2O15432 143 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 HRASP01112 189 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 GIPP09681 153 aaPredicted RBP8.42□□□□□ -1.06
COL12A1-206ENST00000474564 ZNF137PP52743 207 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 RAP2BP61225 183 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 ZNF816Q0VGE8 651 aaPredicted RBP8.42□□□□□ -1.06
COL12A1-206ENST00000474564 KLRD1Q13241 179 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 TPTE2P1Q5T6R2 138 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 ZNF833PQ6ZTB9 187 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 TCTE3Q8IZS6 198 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 OR11H7Q8NGC8 314 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 OR4S2Q8NH73 311 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 MRGPRFQ96AM1 343 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 GALNT14Q96FL9 552 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 ST6GAL2Q96JF0 529 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 FYTTD1Q96QD9 318 aaKnown RBP8.42□□□□□ -1.06
COL12A1-206ENST00000474564 PARP12Q9H0J9 701 aaKnown RBP8.42□□□□□ -1.06
COL12A1-206ENST00000474564 RANBP3Q9H6Z4 567 aaPredicted RBP8.42□□□□□ -1.06
COL12A1-206ENST00000474564 NUP50Q9UKX7 468 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 HILPDAQ9Y5L2 63 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 AKAP6Q13023 2319 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 MALRD1Q5VYJ5 2156 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 BTBD17A6NE02 478 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 ODF3BA8MYP8 253 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 CCSO14618 274 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 FCGR3BO75015 233 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 SIX6O95475 246 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 HOXB5P09067 269 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 FBP1P09467 338 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 OR5AC1P0C628 307 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 FAM106CPP0CH98 169 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 DUTP33316 252 aaKnown RBP8.41□□□□□ -1.06
COL12A1-206ENST00000474564 SAA4P35542 130 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 CD300CQ08708 224 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 SSX2Q16385 188 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 RPL39P5Q59GN2 51 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 SPAG16Q8N0X2 631 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 OR4P4Q8NGL7 312 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 OR2T35Q8NGX2 323 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 MITD1Q8WV92 249 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 ASB13Q8WXK3 278 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 TMEM230Q96A57 120 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 FLYWCH2Q96CP2 140 aaKnown RBP8.41□□□□□ -1.06
COL12A1-206ENST00000474564 RRNAD1Q96FB5 475 aaKnown RBP8.41□□□□□ -1.06
COL12A1-206ENST00000474564 SLC35D1Q9NTN3 355 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 CACFD1Q9UGQ2 172 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 WASHC3Q9Y3C0 194 aa8.41□□□□□ -1.06
COL12A1-206ENST00000474564 GCN1Q92616 2671 aaKnown RBP8.41□□□□□ -1.06
COL12A1-206ENST00000474564 FASNP49327 2511 aaKnown RBP8.4□□□□□ -1.06
COL12A1-206ENST00000474564 A0A0B4J2A0 478 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 IGHV1-3A0A0C4DH29 117 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 DUXBA0A1W2PPF3 345 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 RBFOX2O43251 390 aaKnown RBP eCLIP8.4□□□□□ -1.06
COL12A1-206ENST00000474564 HPRT1P00492 218 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 C1QBP02746 253 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 CXCL3P19876 107 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 CD1BP29016 333 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 LPAR6P43657 344 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 REG1BP48304 166 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 CYCSP99999 105 aaKnown RBP8.4□□□□□ -1.06
COL12A1-206ENST00000474564 FGL1Q08830 312 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 SMCO1Q147U7 214 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 THOC7Q6I9Y2 204 aaKnown RBP8.4□□□□□ -1.06
COL12A1-206ENST00000474564 FAM53AQ6NSI3 398 aaPredicted RBP8.4□□□□□ -1.06
COL12A1-206ENST00000474564 RBMS3Q6XE24 437 aaKnown RBP8.4□□□□□ -1.06
COL12A1-206ENST00000474564 LIAT1Q6ZQX7 453 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 NOXA1Q86UR1 476 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 LDLRAD3Q86YD5 345 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 PDPNQ86YL7 162 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 CIARTQ8N365 385 aaPredicted RBP8.4□□□□□ -1.06
COL12A1-206ENST00000474564 OR4C13Q8NGP0 309 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 OR5M8Q8NGP6 311 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 IL22RA2Q969J5 263 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 ZDHHC16Q969W1 377 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 HYLS1Q96M11 299 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 TSNAXQ99598 290 aaKnown RBP8.4□□□□□ -1.06
COL12A1-206ENST00000474564 SPIN2AQ99865 258 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 SPIN2BQ9BPZ2 258 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 TMEM222Q9H0R3 208 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 SHPKQ9UHJ6 478 aa8.4□□□□□ -1.06
COL12A1-206ENST00000474564 HRNRQ86YZ3 2850 aaPredicted RBP8.4□□□□□ -1.06
COL12A1-206ENST00000474564 FXYD6-FXYD2A0A087WZ82 144 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 LY6LH3BQJ8 138 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 SMLR1H3BR10 107 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 SHOXO15266 292 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 SCGB1D2O95969 90 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 PET100P0DJ07 73 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 CT45A6P0DMU7 189 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 CT45A5P0DMU8 189 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 CT45A7P0DMV0 189 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 C4BPBP20851 252 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 NUP62P37198 522 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-206ENST00000474564 LGALS7P47929 136 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 AKR1C2P52895 323 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 NKX2-5P52952 324 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-206ENST00000474564 DLX1P56177 255 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 RPS16P62249 146 aaKnown RBP8.39□□□□□ -1.07
COL12A1-206ENST00000474564 PRB3Q04118 309 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-206ENST00000474564 HES1Q14469 280 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 SP6Q3SY56 376 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms