RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 OR2D2Q9H210 308 aa12.69□□□□□ -0.38
CPA4-205ENST00000474254 ELF5Q9UKW6 265 aaPredicted RBP12.69□□□□□ -0.38
CPA4-205ENST00000474254 FBXO7Q9Y3I1 522 aa12.69□□□□□ -0.38
CPA4-205ENST00000474254 M0R1X1 148 aa12.68□□□□□ -0.38
CPA4-205ENST00000474254 SCGNO76038 276 aa12.68□□□□□ -0.38
CPA4-205ENST00000474254 OR8U9P0C7N5 309 aa12.68□□□□□ -0.38
CPA4-205ENST00000474254 NHLRC4P0CG21 123 aaPredicted RBP12.68□□□□□ -0.38
CPA4-205ENST00000474254 SNRPBP14678 240 aaKnown RBP12.68□□□□□ -0.38
CPA4-205ENST00000474254 TALDO1P37837 337 aa12.68□□□□□ -0.38
CPA4-205ENST00000474254 LINC00205P59089 165 aa12.68□□□□□ -0.38
CPA4-205ENST00000474254 CX3CL1P78423 397 aa12.68□□□□□ -0.38
CPA4-205ENST00000474254 PLGLAQ15195 96 aa12.68□□□□□ -0.38
CPA4-205ENST00000474254 PSG5Q15238 335 aa12.68□□□□□ -0.38
CPA4-205ENST00000474254 MINDY2Q8NBR6 621 aa12.68□□□□□ -0.38
CPA4-205ENST00000474254 CENPOQ9BU64 300 aa12.68□□□□□ -0.38
CPA4-205ENST00000474254 GAB2Q9UQC2 676 aa12.68□□□□□ -0.38
CPA4-205ENST00000474254 IGKV1D-8A0A087WSZ0 117 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 CD36P16671 472 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 SCAND1P57086 179 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 FHL3Q13643 280 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 KIAA0141Q14154 515 aaPredicted RBP12.67□□□□□ -0.38
CPA4-205ENST00000474254 ECSCRQ19T08 205 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 CDNFQ49AH0 187 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 HACD4Q5VWC8 232 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 OR5M8Q8NGP6 311 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 C5orf30Q96GV9 206 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 UBE2E2Q96LR5 201 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 TSNAXQ99598 290 aaKnown RBP12.67□□□□□ -0.38
CPA4-205ENST00000474254 GINS4Q9BRT9 223 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 KLK15Q9H2R5 256 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 RNF167Q9H6Y7 350 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 SLC35D1Q9NTN3 355 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 SDHAF2Q9NX18 166 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 RHBDL2Q9NX52 303 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 METTL1Q9UBP6 276 aaKnown RBP12.67□□□□□ -0.38
CPA4-205ENST00000474254 U3KQK5 164 aa12.67□□□□□ -0.38
CPA4-205ENST00000474254 SORL1Q92673 2214 aa12.66□□□□□ -0.38
CPA4-205ENST00000474254 LOC100506127A0A0U1RQW1 187 aa12.66□□□□□ -0.38
CPA4-205ENST00000474254 TMEM235A6NFC5 223 aa12.66□□□□□ -0.38
CPA4-205ENST00000474254 FCN1O00602 326 aa12.66□□□□□ -0.38
CPA4-205ENST00000474254 CLEC2LP0C7M8 214 aa12.66□□□□□ -0.38
CPA4-205ENST00000474254 MXD1Q05195 221 aa12.66□□□□□ -0.38
CPA4-205ENST00000474254 C9orf66Q5T8R8 295 aa12.66□□□□□ -0.38
CPA4-205ENST00000474254 TMEM65Q6PI78 240 aa12.66□□□□□ -0.38
CPA4-205ENST00000474254 H1FOOQ8IZA3 346 aaPredicted RBP12.66□□□□□ -0.38
CPA4-205ENST00000474254 TCTEX1D1Q8N7M0 179 aa12.66□□□□□ -0.38
CPA4-205ENST00000474254 ZNF491Q8N8L2 437 aa12.66□□□□□ -0.38
CPA4-205ENST00000474254 GNB4Q9HAV0 340 aa12.66□□□□□ -0.38
CPA4-205ENST00000474254 A0A1W2PN81 502 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 SOX15O60248 233 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 EGR2P11161 476 aaPredicted RBP12.65□□□□□ -0.38
CPA4-205ENST00000474254 CHRNA7P36544 502 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.38
CPA4-205ENST00000474254 RPS16P62249 146 aaKnown RBP12.65□□□□□ -0.38
CPA4-205ENST00000474254 PITPNAQ00169 270 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 RUNX1Q01196 453 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 ZNF260Q3ZCT1 412 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 ABHD5Q8WTS1 349 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 NUDCD2Q8WVJ2 157 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 FLYWCH2Q96CP2 140 aaKnown RBP12.65□□□□□ -0.38
CPA4-205ENST00000474254 SLC25A38Q96DW6 304 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 DCSTAMPQ9H295 470 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 TPSG1Q9NRR2 321 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 FOXA2Q9Y261 457 aaPredicted RBP12.65□□□□□ -0.38
CPA4-205ENST00000474254 VSIG4Q9Y279 399 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 NUBP2Q9Y5Y2 271 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 ETV7Q9Y603 341 aa12.65□□□□□ -0.38
CPA4-205ENST00000474254 I3L521 148 aa12.64□□□□□ -0.39
CPA4-205ENST00000474254 SLC25A17O43808 307 aa12.64□□□□□ -0.39
CPA4-205ENST00000474254 CA2P00918 260 aa12.64□□□□□ -0.39
CPA4-205ENST00000474254 RAB9AP51151 201 aa12.64□□□□□ -0.39
CPA4-205ENST00000474254 GNG2P59768 71 aa12.64□□□□□ -0.39
CPA4-205ENST00000474254 TAGLNQ01995 201 aaKnown RBP12.64□□□□□ -0.39
CPA4-205ENST00000474254 ZNF562Q6V9R5 426 aa12.64□□□□□ -0.39
CPA4-205ENST00000474254 PRR25Q96S07 402 aa12.64□□□□□ -0.39
CPA4-205ENST00000474254 CLCC1Q96S66 551 aa12.64□□□□□ -0.39
CPA4-205ENST00000474254 RBM7Q9Y580 266 aaKnown RBP12.64□□□□□ -0.39
CPA4-205ENST00000474254 A3GALT2U3KPV4 340 aa12.64□□□□□ -0.39
CPA4-205ENST00000474254 SEC14L6B5MCN3 397 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 IGLV2-23P01705 113 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 CTXN2P0C2S0 81 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 ECI1P42126 302 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 TMEM267Q0VDI3 215 aaPredicted RBP12.63□□□□□ -0.39
CPA4-205ENST00000474254 TIMM50Q3ZCQ8 353 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 AKIRIN2Q53H80 203 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 PYHIN1Q6K0P9 492 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 PPP1R27Q86WC6 154 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 OR11H1Q8NG94 326 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 OR5H6Q8NGV6 325 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 DDB2Q92466 427 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 ARPC1AQ92747 370 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 HARBI1Q96MB7 349 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 FAM103A1Q9BTL3 118 aaKnown RBP12.63□□□□□ -0.39
CPA4-205ENST00000474254 ST6GALNAC5Q9BVH7 336 aa12.63□□□□□ -0.39
CPA4-205ENST00000474254 SSX5O60225 188 aa12.62□□□□□ -0.39
CPA4-205ENST00000474254 TNFAIP8O95379 198 aa12.62□□□□□ -0.39
CPA4-205ENST00000474254 OR8U8P0C7N1 319 aa12.62□□□□□ -0.39
CPA4-205ENST00000474254 LGALS7P47929 136 aa12.62□□□□□ -0.39
CPA4-205ENST00000474254 GNB1P62873 340 aa12.62□□□□□ -0.39
CPA4-205ENST00000474254 SSBP2P81877 361 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms