RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SPANXB1Q9NS25 103 aaPredicted RBP0.99□□□□□ -2.25
ECHDC1-213ENST00000474240 PARVAQ9NVD7 372 aa0.99□□□□□ -2.25
ECHDC1-213ENST00000474240 TIMM9Q9Y5J7 89 aa0.99□□□□□ -2.25
ECHDC1-213ENST00000474240 SLX4Q8IY92 1834 aa0.99□□□□□ -2.25
ECHDC1-213ENST00000474240 NPATQ14207 1427 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 METTL15A6NJ78 407 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 CCRL2O00421 344 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 MRASO14807 208 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 MPZL2O60487 215 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 ASS1P00966 412 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 OR10J1P30954 320 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 G6PCP35575 357 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 HAAOP46952 286 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 CDK9P50750 372 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 IDH3GP51553 393 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 TAS2R20P59543 309 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 HIST1H4AP62805 103 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 HOXC5Q00444 222 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 AKR1C1Q04828 323 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 SLAMF1Q13291 335 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 ZNHIT3Q15649 155 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 C9orf64Q5T6V5 341 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 FAM45BPQ6NSW5 357 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 COPS6Q7L5N1 327 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 RPS4Y2Q8TD47 263 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 FAM210AQ96ND0 272 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 NDEL1Q9GZM8 345 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 POFUT2Q9Y2G5 429 aa0.98□□□□□ -2.25
ECHDC1-213ENST00000474240 IGHV3-64A0A075B6Q5 118 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 TMSB15BA0A087X1C1 80 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 C5orf49A4QMS7 147 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 ZNF728P0DKX0 622 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 AKR1C3P42330 323 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 TMEM33P57088 247 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 FXYD7P58549 80 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 SMAGPQ0VAQ4 97 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 LYZL1Q6UWQ5 148 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 DRAM2Q6UX65 266 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 ZNF705AQ6ZN79 300 aaPredicted RBP0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 KTN1-AS1Q86SY8 53 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 LRRC34Q8IZ02 419 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 BLIDQ8IZY5 108 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 DCUN1D5Q9BTE7 237 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 TIPINQ9BVW5 301 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 OR52A5Q9H2C5 316 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 C16orf95Q9H693 158 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 TREM1Q9NP99 234 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 HDGFL3Q9Y3E1 203 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 DISP1Q96F81 1524 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 ADAMTSL1Q8N6G6 1762 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 TENM1Q9UKZ4 2725 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 NUP160Q12769 1436 aa0.97□□□□□ -2.25
ECHDC1-213ENST00000474240 TRPM6Q9BX84 2022 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 NCKAP5O14513 1909 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 IGKV3D-7A0A0C4DH55 119 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 IGKV3OR2-268A0A0C4DH90 116 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 A0A1B0GW54 56 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 HMSDA8MTL9 139 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 MT-CO2P00403 227 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 CRPP02741 224 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 CCL3P10147 92 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 CRYBB3P26998 211 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 TBPL1P62380 186 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 GNA13Q14344 377 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 LCN8Q6JVE9 175 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 TMEM86AQ8N2M4 240 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 DAND5Q8N907 189 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 CLDND2Q8NHS1 167 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 C10orf105Q8TEF2 133 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 SMCR5Q8TEV8 140 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 MROQ9BYG7 248 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 ZNHIT6Q9NWK9 470 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 PLCH2O75038 1416 aa0.96□□□□□ -2.26
ECHDC1-213ENST00000474240 CHD2O14647 1828 aaKnown RBP0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 IGKV3-7A0A075B6H7 116 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 IGKV2D-26A0A0A0MRZ7 120 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 TEX50A0A1B0GTY4 177 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 HSBP1L1C9JCN9 74 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 FTCDNL1E5RQL4 147 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 ATP8B1O43520 1251 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 SERPINA7P05543 415 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 OCMP0CE72 109 aaPredicted RBP0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 CA5AP35218 305 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 RBM11P57052 281 aaKnown RBP0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 SNAP25P60880 206 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 FABP5Q01469 135 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 TMEM267Q0VDI3 215 aaPredicted RBP0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 OR10K2Q6IF99 312 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 XKRXQ6PP77 449 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 SLC51BQ86UW2 128 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 LFNGQ8NES3 379 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 ZNF514Q96K75 400 aaPredicted RBP0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 NMNAT3Q96T66 252 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 DHRS9Q9BPW9 319 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 GNB1LQ9BYB4 327 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 NSRP1Q9H0G5 558 aaKnown RBP0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 SPACA1Q9HBV2 294 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 FKBP14Q9NWM8 211 aa0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 PCYT1BQ9Y5K3 369 aaPredicted RBP0.95□□□□□ -2.26
ECHDC1-213ENST00000474240 A0A1W2PP64 1363 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms