RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 PLCH2O75038 1416 aa1.84□□□□□ -2.11
PRPF40A-208ENST00000472760 COL4A2P08572 1712 aa1.84□□□□□ -2.11
PRPF40A-208ENST00000472760 IGHV3-15A0A0B4J1V0 119 aa1.84□□□□□ -2.11
PRPF40A-208ENST00000472760 A0A0G2JQZ4 141 aa1.84□□□□□ -2.11
PRPF40A-208ENST00000472760 C2orf74A8MZ97 194 aa1.84□□□□□ -2.11
PRPF40A-208ENST00000472760 BIRC5O15392 142 aa1.84□□□□□ -2.11
PRPF40A-208ENST00000472760 SNAP25P60880 206 aa1.84□□□□□ -2.11
PRPF40A-208ENST00000472760 FABP5Q01469 135 aa1.84□□□□□ -2.11
PRPF40A-208ENST00000472760 PRDX4Q13162 271 aa1.84□□□□□ -2.11
PRPF40A-208ENST00000472760 SMIM19Q96E16 107 aa1.84□□□□□ -2.11
PRPF40A-208ENST00000472760 IMP3Q9NV31 184 aaKnown RBP1.84□□□□□ -2.11
PRPF40A-208ENST00000472760 BAHCC1Q9P281 2608 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 C1orf232A0A0U1RR37 186 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 C5orf49A4QMS7 147 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 GOLGA8KD6RF30 607 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 GOLGA8MH3BSY2 632 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 MT-CO2P00403 227 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 XCL1P47992 114 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 TAS2R30P59541 319 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 GNA12Q03113 381 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 TMEM251Q8N6I4 163 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 DAND5Q8N907 189 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 SLC35G5Q96KT7 338 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 TMEM109Q9BVC6 243 aa1.83□□□□□ -2.12
PRPF40A-208ENST00000472760 MDFIC2A0A1B0GVS7 189 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 ARRDC5A6NEK1 342 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 F5H768 121 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 J3QQQ9 107 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 ITGB1BP1O14713 200 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 NDUFB2O95178 105 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 PEBP1P30086 187 aaKnown RBP1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 RPL14P50914 215 aaKnown RBP1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 MAP3K7CLP57077 242 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 RPL26P61254 145 aaKnown RBP1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 HLA-DRB3P79483 266 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 KRTAP13-4Q3LI77 160 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 HSP90B2PQ58FF3 399 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 Q6ZS52 159 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 NAA40Q86UY6 237 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 LHFPL1Q86WI0 220 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 C12orf43Q96C57 262 aaKnown RBP1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 KCTD7Q96MP8 289 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 DERL2Q9GZP9 239 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 HDHD2Q9H0R4 259 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 PLEKHJ1Q9NW61 149 aa1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 RPL26L1Q9UNX3 145 aaKnown RBP1.82□□□□□ -2.12
PRPF40A-208ENST00000472760 ZNF638Q14966 1978 aaKnown RBP1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 IGLV3-9A0A075B6K5 115 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 A0A1W2PQD3 144 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 ZNF860A6NHJ4 632 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 CETN3O15182 167 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 COCHO43405 550 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 HLA-DQB2P05538 268 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 ZNF728P0DKX0 622 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 CDC34P49427 236 aaPredicted RBP1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 CXCR4P61073 352 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 HOXC5Q00444 222 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 ZNF90Q03938 601 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 N4BP2L1Q5TBK1 243 aaPredicted RBP1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 CMTM5Q96DZ9 223 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 ANKRD36BP1Q96IX9 119 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 DRC3Q9H069 523 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 HES4Q9HCC6 221 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 FAM215AQ9Y5M1 114 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 CHD2O14647 1828 aaKnown RBP1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 ITGB4P16144 1822 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 CACNA1GO43497 2377 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 OTOFQ9HC10 1997 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 RTEL1-TNFRSF6BF6WH68 1400 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 PXDNLA1KZ92 1463 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 MYO9BQ13459 2157 aa1.81□□□□□ -2.12
PRPF40A-208ENST00000472760 OR6C6A6NF89 314 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 TXNDC9O14530 226 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 SSNA1O43805 119 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 TPM3P06753 285 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 UCHL1P09936 223 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 CD24P25063 80 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 RPL27AP46776 148 aaKnown RBP1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 GABRA2P47869 451 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 RPS24P62847 133 aaKnown RBP1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 ERHP84090 104 aaKnown RBP1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 MGAT3Q09327 533 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 MED21Q13503 144 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 JOSD1Q15040 202 aaPredicted RBP1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 UAP1Q16222 522 aaPredicted RBP1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 PABPC1L2AQ5JQF8 200 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 SPATA12Q7Z6I5 190 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 SLC35E3Q7Z769 313 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 Q8N402 240 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 OR5J2Q8NH18 312 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 CLDND2Q8NHS1 167 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 LHFPL5Q8TAF8 219 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 NMNAT3Q96T66 252 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 TMEM222Q9H0R3 208 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 PRO2289Q9P1D8 64 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 THSD7AQ9UPZ6 1657 aa1.8□□□□□ -2.12
PRPF40A-208ENST00000472760 A0A0A6YYH2 397 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 TRGV5A0A0B4J1U4 118 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 A6NJ64 397 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 NPYP01303 97 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms