RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 S100A8P05109 93 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 IGHV3-43DP0DP04 118 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 FAM236CP0DP71 79 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 BTCP35070 178 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 HSPA9P38646 679 aaKnown RBP2.78□□□□□ -1.96
COL11A1-208ENST00000470170 GFERP55789 205 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 CTBP2P56545 445 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 RPS20P60866 119 aaKnown RBP2.78□□□□□ -1.96
COL11A1-208ENST00000470170 CDK5Q00535 292 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 MOBPQ13875 183 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 RGNQ15493 299 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 LY6EQ16553 131 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 SCGB2B2Q4G0G5 96 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 LRRC10Q5BKY1 277 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 RNASE10Q5GAN6 216 aaKnown RBP2.78□□□□□ -1.96
COL11A1-208ENST00000470170 TCEAL5Q5H9L2 206 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 UBE2NLQ5JXB2 153 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 LCN8Q6JVE9 175 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 ZNF493Q6ZR52 646 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 RNF165Q6ZSG1 346 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 SAXO1Q8IYX7 474 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 UMODL1-AS1Q8N2C9 162 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 ANKRD29Q8N6D5 301 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 TWIST2Q8WVJ9 160 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 GALMQ96C23 342 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 TM4SF18Q96CE8 201 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 GPR146Q96CH1 333 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 PDXPQ96GD0 296 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 CCDC115Q96NT0 180 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 OR2M2Q96R28 347 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 ANAPC13Q9BS18 74 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 C1orf50Q9BV19 199 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 GGACTQ9BVM4 153 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 COMMD5Q9GZQ3 224 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 CHST6Q9GZX3 395 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 PBOV1Q9GZY1 135 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 RBFOX1Q9NWB1 397 aaKnown RBP2.78□□□□□ -1.96
COL11A1-208ENST00000470170 MED11Q9P086 117 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 LAMTOR3Q9UHA4 124 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 HSPB8Q9UJY1 196 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 RFNGQ9Y644 331 aa2.78□□□□□ -1.96
COL11A1-208ENST00000470170 WDR62O43379 1518 aa2.78□□□□□ -1.97
COL11A1-208ENST00000470170 CEP164Q9UPV0 1460 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 PTPRTO14522 1441 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 KIF15Q9NS87 1388 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 HIVEP2P31629 2446 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 RIMS1Q86UR5 1692 aaKnown RBP2.77□□□□□ -1.97
COL11A1-208ENST00000470170 IGHV6-1A0A0B4J1U7 121 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 TRAV26-2A0A0B4J265 109 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 A0A1B0GX51 115 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 TNFSF15O95150 251 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 HLA-DRB1P01911 266 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 FABP3P05413 133 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 C8GP07360 202 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 LGALS1P09382 135 aaKnown RBP2.77□□□□□ -1.97
COL11A1-208ENST00000470170 UBBP0CG47 229 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 MPC1LP0DKB6 136 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 SCGB1C2P0DMR2 95 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 COX7A1P24310 79 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 ZNF138P52744 262 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 KLF3P57682 345 aaPredicted RBP2.77□□□□□ -1.97
COL11A1-208ENST00000470170 GNG2P59768 71 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 SNRPD2P62316 118 aaKnown RBP2.77□□□□□ -1.97
COL11A1-208ENST00000470170 MRPS10P82664 201 aaKnown RBP2.77□□□□□ -1.97
COL11A1-208ENST00000470170 EMX2Q04743 252 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 FABP9Q0Z7S8 132 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 IL15RAQ13261 267 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 PNOCQ13519 176 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 RBMY1FQ15415 496 aaKnown RBP2.77□□□□□ -1.97
COL11A1-208ENST00000470170 FBXL19-AS1Q494R0 122 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 MESTQ5EB52 335 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 IBA57Q5T440 356 aaKnown RBP2.77□□□□□ -1.97
COL11A1-208ENST00000470170 FAM222AQ5U5X8 452 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 NXNL2Q5VZ03 156 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 KDM4DQ6B0I6 523 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 Q6ZSR6 202 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 ZNF283Q8N7M2 679 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 OR1L1Q8NH94 360 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 SCGB1C1Q8TD33 95 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 DCAKDQ8WVC6 231 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 GHSRQ92847 366 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 PLEKHB2Q96CS7 222 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 SLC25A44Q96H78 314 aaPredicted RBP2.77□□□□□ -1.97
COL11A1-208ENST00000470170 SPACA5Q96QH8 159 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 LYSMD1Q96S90 227 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 DOHHQ9BU89 302 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 SLC25A2Q9BXI2 301 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 OR52D1Q9H346 318 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 LINC00527Q9UJ94 153 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 POMPQ9Y244 141 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 BTRCQ9Y297 605 aa2.77□□□□□ -1.97
COL11A1-208ENST00000470170 RBM7Q9Y580 266 aaKnown RBP2.77□□□□□ -1.97
COL11A1-208ENST00000470170 WRNQ14191 1432 aaPredicted RBP eCLIP2.76□□□□□ -1.97
COL11A1-208ENST00000470170 NPATQ14207 1427 aa2.76□□□□□ -1.97
COL11A1-208ENST00000470170 UHRF1BP1Q6BDS2 1440 aa2.76□□□□□ -1.97
COL11A1-208ENST00000470170 LAMC3Q9Y6N6 1575 aa2.76□□□□□ -1.97
COL11A1-208ENST00000470170 IGKV1D-17A0A075B6S4 117 aa2.76□□□□□ -1.97
COL11A1-208ENST00000470170 A0A087WX48 190 aa2.76□□□□□ -1.97
COL11A1-208ENST00000470170 A0A096LPI6 279 aa2.76□□□□□ -1.97
COL11A1-208ENST00000470170 IGHV2-26A0A0B4J1V2 119 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms