RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 AWAT1Q58HT5 328 aa14.4□□□□□ -0.1
MRPL28-208ENST00000469744 H1FOOQ8IZA3 346 aaPredicted RBP14.4□□□□□ -0.1
MRPL28-208ENST00000469744 C3orf56Q8N813 242 aa14.4□□□□□ -0.1
MRPL28-208ENST00000469744 ANGPTL6Q8NI99 470 aa14.4□□□□□ -0.1
MRPL28-208ENST00000469744 LHX4Q969G2 390 aa14.4□□□□□ -0.1
MRPL28-208ENST00000469744 TMEM56Q96MV1 263 aa14.4□□□□□ -0.1
MRPL28-208ENST00000469744 TNFRSF19Q9NS68 423 aa14.4□□□□□ -0.1
MRPL28-208ENST00000469744 MBNL3Q9NUK0 354 aaKnown RBP14.4□□□□□ -0.1
MRPL28-208ENST00000469744 ONECUT1Q9UBC0 465 aa14.4□□□□□ -0.1
MRPL28-208ENST00000469744 TMEM56-RWDD3S4R434 201 aa14.4□□□□□ -0.1
MRPL28-208ENST00000469744 CENPVL3A0A0U1RRI6 287 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 C3orf85A0A1B0GTC6 90 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 NKX6-3A6NJ46 265 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 TAAR5O14804 337 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 BET1O15155 118 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 NDUFB3O43676 98 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 SPDEFO95238 335 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 S100GP29377 79 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 OR1S1Q8NH92 325 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 H1FXQ92522 213 aaKnown RBP14.39□□□□□ -0.11
MRPL28-208ENST00000469744 KIRREL1Q96J84 757 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 GAFA1Q96PS6 74 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 ZNF471Q9BX82 626 aaPredicted RBP14.39□□□□□ -0.11
MRPL28-208ENST00000469744 SLC5A7Q9GZV3 580 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 OR5AC2Q9NZP5 309 aa14.39□□□□□ -0.11
MRPL28-208ENST00000469744 HSPB6O14558 160 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 HOXA3O43365 443 aaPredicted RBP14.38□□□□□ -0.11
MRPL28-208ENST00000469744 HAND1O96004 215 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 TPT1P13693 172 aaKnown RBP14.38□□□□□ -0.11
MRPL28-208ENST00000469744 GABRA2P47869 451 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 DLX1P56177 255 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 EIF5AP63241 154 aaKnown RBP14.38□□□□□ -0.11
MRPL28-208ENST00000469744 HMGN3Q15651 99 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 LRRC10Q5BKY1 277 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 ZNF788Q6ZQV5 615 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 OR10J5Q8NHC4 309 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 LRRC20Q8TCA0 184 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 IL22RA2Q969J5 263 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 ZDHHC16Q969W1 377 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 RRNAD1Q96FB5 475 aaKnown RBP14.38□□□□□ -0.11
MRPL28-208ENST00000469744 TMEM222Q9H0R3 208 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 PLEKHA2Q9HB19 425 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 GSKIPQ9P0R6 139 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 OR2W1Q9Y3N9 320 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 IGKV1D-17A0A075B6S4 117 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 SIRPB1O00241 398 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 DEDDO75618 318 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 CDS2O95674 445 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 RNASE1P07998 156 aaKnown RBP14.38□□□□□ -0.11
MRPL28-208ENST00000469744 HKR1P10072 659 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 LUMP51884 338 aaPredicted RBP14.38□□□□□ -0.11
MRPL28-208ENST00000469744 AANATQ16613 207 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 SP6Q3SY56 376 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 SLC35E4Q6ICL7 350 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 ACP7Q6ZNF0 438 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 VMO1Q7Z5L0 202 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 CMTM1Q8IZ96 169 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 PLPPR1Q8TBJ4 325 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 SECTM1Q8WVN6 248 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 ABHD14BQ96IU4 210 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 PFDN2Q9UHV9 154 aa14.38□□□□□ -0.11
MRPL28-208ENST00000469744 IGHV1-69DA0A0B4J2H0 117 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 IGHV1-69P01742 117 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 UCP1P25874 307 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 PAX5Q02548 391 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 TBC1D26Q86UD7 250 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 LY6G5BQ8NDX9 201 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 BVESQ8NE79 360 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 AKR1E2Q96JD6 320 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 SPIN2AQ99865 258 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 SPIN2BQ9BPZ2 258 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 DCTN5Q9BTE1 182 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 SIRT7Q9NRC8 400 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 CYTL1Q9NRR1 136 aa14.37□□□□□ -0.11
MRPL28-208ENST00000469744 SLC25A10Q9UBX3 287 aaPredicted RBP14.37□□□□□ -0.11
MRPL28-208ENST00000469744 IGKV1D-13A0A0B4J2D9 117 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 TMEM30CPA0ZSE6 113 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 E5RGE8 158 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 CLDN34H7C241 214 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 SIGLEC5O15389 551 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 IGKV1-13P0DP09 117 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 PSG2P11465 335 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 NDUFB7P17568 137 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 RCC1P18754 421 aaPredicted RBP14.36□□□□□ -0.11
MRPL28-208ENST00000469744 S100A10P60903 97 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 ZNF818PQ6ZRF7 136 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 LYZL2Q7Z4W2 148 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 EIF4E3Q8N5X7 224 aaKnown RBP14.36□□□□□ -0.11
MRPL28-208ENST00000469744 ZNRF1Q8ND25 227 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 TP53RKQ96S44 253 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 DNTTIP1Q9H147 329 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 TRAPPC2LQ9UL33 140 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 NSG2Q9Y328 171 aa14.36□□□□□ -0.11
MRPL28-208ENST00000469744 UBE2J1Q9Y385 318 aaPredicted RBP14.36□□□□□ -0.11
MRPL28-208ENST00000469744 MFSD2BA6NFX1 497 aa14.35□□□□□ -0.11
MRPL28-208ENST00000469744 H0Y980 276 aa14.35□□□□□ -0.11
MRPL28-208ENST00000469744 CEBPDP49716 269 aaPredicted RBP14.35□□□□□ -0.11
MRPL28-208ENST00000469744 P2RX3P56373 397 aa14.35□□□□□ -0.11
MRPL28-208ENST00000469744 KLRD1Q13241 179 aa14.35□□□□□ -0.11
MRPL28-208ENST00000469744 SMIM21Q3B7S5 101 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms