RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 SDHAF2Q9NX18 166 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 NUBP2Q9Y5Y2 271 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 YLPM1P49750 1951 aaKnown RBP6.58□□□□□ -1.36
HDAC6-216ENST00000468949 KIAA2026Q5HYC2 2103 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 TRAV6A0A075B6T7 132 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 PIGBOS1A0A0B4J2F0 54 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 A0A0U1RQK1 487 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 TCRBP04435 133 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 SERPINE2P07093 398 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 FAM157CP0CG43 387 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 RRASP10301 218 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 AKR1C4P17516 323 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 VAMP1P23763 118 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 SLC6A1P30531 599 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 ZNF137PP52743 207 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 IFITM3Q01628 133 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 TAGLNQ01995 201 aaKnown RBP6.58□□□□□ -1.36
HDAC6-216ENST00000468949 ZNF816Q0VGE8 651 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-216ENST00000468949 HES1Q14469 280 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 C4orf46Q504U0 113 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 KLF17Q5JT82 389 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-216ENST00000468949 UTF1Q5T230 341 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 ZNF833PQ6ZTB9 187 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 BVESQ8NE79 360 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 OR4S2Q8NH73 311 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 RNASE11Q8TAA1 199 aaKnown RBP6.58□□□□□ -1.36
HDAC6-216ENST00000468949 C22orf15Q8WYQ4 148 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 AGMATQ9BSE5 352 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 MRPL20Q9BYC9 149 aaKnown RBP6.58□□□□□ -1.36
HDAC6-216ENST00000468949 SLC35D1Q9NTN3 355 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 VSIG4Q9Y279 399 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 KCNIP3Q9Y2W7 256 aa6.58□□□□□ -1.36
HDAC6-216ENST00000468949 DSCAML1Q8TD84 2053 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 ABCA1O95477 2261 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 ABCA2Q9BZC7 2435 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 IGHV1-3A0A0C4DH29 117 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 TIMM23O14925 209 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 FCGR3BO75015 233 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 B3GALNT1O75752 331 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 ATG12O94817 140 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 DHFRP00374 187 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 IFNA2P01563 188 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 HLA-AP01891 365 aaKnown RBP6.57□□□□□ -1.36
HDAC6-216ENST00000468949 RPLP1P05386 114 aaKnown RBP6.57□□□□□ -1.36
HDAC6-216ENST00000468949 H2AFB2P0C5Z0 115 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 FAM106CPP0CH98 169 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 GNRHRP30968 328 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 MC5RP33032 325 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 BTCP35070 178 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 RAB25P57735 213 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 ERVK-16P61578 105 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 RND3P61587 244 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 SRPXP78539 464 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 LRRC75BQ2VPJ9 315 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 OR2B11Q5JQS5 317 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 C1orf229Q6ZS94 237 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-216ENST00000468949 NRARPQ7Z6K4 114 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 TBC1D26Q86UD7 250 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 PRIMA1Q86XR5 153 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 PDPNQ86YL7 162 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 DRAXINQ8NBI3 349 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-216ENST00000468949 MINDY2Q8NBR6 621 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 CD300LFQ8TDQ1 290 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 ZNF418Q8TF45 676 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-216ENST00000468949 ZFAND2BQ8WV99 257 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 GPN1Q9HCN4 374 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-216ENST00000468949 GAB2Q9UQC2 676 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 WASHC3Q9Y3C0 194 aa6.57□□□□□ -1.36
HDAC6-216ENST00000468949 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.57□□□□□ -1.369e-8■■■□□ 18
HDAC6-216ENST00000468949 IGHV3-72A0A0B4J1Y9 119 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 C3orf85A0A1B0GTC6 90 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 A0A1W2PPI3 338 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 H0Y980 276 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 MPPED1O15442 326 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 PRAF2O60831 178 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 PEX14O75381 377 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 PGLYRP1O75594 196 aaPredicted RBP6.56□□□□□ -1.36
HDAC6-216ENST00000468949 FSHBP01225 129 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 TMEM11P17152 192 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 DUTP33316 252 aaKnown RBP6.56□□□□□ -1.36
HDAC6-216ENST00000468949 UBE2MP61081 183 aaKnown RBP6.56□□□□□ -1.36
HDAC6-216ENST00000468949 PLGLAQ15195 96 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 DEFB112Q30KQ8 113 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 TMEM128Q5BJH2 165 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 DHRS7BQ6IAN0 325 aaPredicted RBP6.56□□□□□ -1.36
HDAC6-216ENST00000468949 GLDNQ6ZMI3 551 aaPredicted RBP6.56□□□□□ -1.36
HDAC6-216ENST00000468949 C9orf139Q6ZV77 190 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 ODF3L1Q8IXM7 274 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 SPAG16Q8N0X2 631 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 TCTEX1D1Q8N7M0 179 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 COQ8AQ8NI60 647 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 CASTOR1Q8WTX7 329 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 HARBI1Q96MB7 349 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 FAM210AQ96ND0 272 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 NABP2Q9BQ15 211 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 ZNF251Q9BRH9 671 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 AIFM2Q9BRQ8 373 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 C5orf66Q9H5L9 145 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 NAA60Q9H7X0 242 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 BEX1Q9HBH7 125 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms