RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 OR8U9P0C7N5 309 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 CGB3P0DN86 165 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 CGB7P0DN87 165 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 AKR1C4P17516 323 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 ZBTB25P24278 435 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 LUMP51884 338 aaPredicted RBP3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 DVL1P1P54792 670 aaPredicted RBP3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 VAMP2P63027 116 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 HERPUD1Q15011 391 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 ABCA11PQ4W5N1 156 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 MORN2Q502X0 79 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 PHLDA2Q53GA4 152 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 VAX1Q5SQQ9 334 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 PIK3CD-AS1Q5SR53 167 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 UTF1Q5T230 341 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 FAHD2BQ6P2I3 314 aaPredicted RBP3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 PLET1Q6UQ28 207 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 DHRS11Q6UWP2 260 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 BTNL3Q6UXE8 466 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 Q6ZS49 121 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 TCF23Q7RTU1 214 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 LYG1Q8N1E2 194 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 GAPTQ8N292 157 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 PNKDQ8N490 385 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 UXS1Q8NBZ7 420 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 WFDC11Q8NEX6 87 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 OR13C8Q8NGS7 320 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 OR8U1Q8NH10 309 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 TERB2Q8NHR7 220 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 GIMAP1Q8WWP7 306 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 CORO2AQ92828 525 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 FAHD2AQ96GK7 314 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 ABHD14BQ96IU4 210 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 PRRT1Q99946 306 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 PARP12Q9H0J9 701 aaKnown RBP3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 NCOR1P1Q9H4R4 102 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 PALMDQ9NP74 551 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 RAB9BQ9NP90 201 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 SIRT7Q9NRC8 400 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 TAS2R3Q9NYW6 316 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNRD1Q9P1U0 126 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 OPN4Q9UHM6 478 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF107Q9UII5 783 aaPredicted RBP3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 PSG11Q9UQ72 335 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 C14orf166Q9Y224 244 aaKnown RBP3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 TANC2Q9HCD6 1990 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 TENM4Q6N022 2769 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 KIAA2026Q5HYC2 2103 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 YLPM1P49750 1951 aaKnown RBP3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 IGKV1D-13A0A0B4J2D9 117 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 IGHV2-70DA0A0C4DH43 119 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 TEX13DA0A0J9YY54 714 aaPredicted RBP3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 C17orf98A8MV24 154 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 B4DSR2 109 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 NPIPB11E5RHQ5 1161 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 ENSAO43768 121 aaKnown RBP3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 YPEL1O60688 119 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 RGS11O94810 467 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 PTTG1O95997 202 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 DHFRP00374 187 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 PPYP01298 95 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 IGHV1-8P0DP01 117 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 IGKV1-13P0DP09 117 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 ANXA7P20073 488 aaKnown RBP3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 TBPP20226 339 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC6A1P30531 599 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 BTCP35070 178 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 GPR12P47775 334 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 REG1BP48304 166 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 PRRX1P54821 245 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 DLX6P56179 175 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 HTD2P86397 168 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 CBX3Q13185 183 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 KLRD1Q13241 179 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 OXA1LQ15070 435 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 CT45A1Q5HYN5 189 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 ASPHD1Q5U4P2 390 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 AADACL3Q5VUY0 350 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 DCAF12L2Q5VW00 463 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 CYB5R2Q6BCY4 276 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 C11orf87Q6NUJ2 197 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 PRSS57Q6UWY2 283 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 VMO1Q7Z5L0 202 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 H1FOOQ8IZA3 346 aaPredicted RBP3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 ABHD12Q8N2K0 398 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 CIARTQ8N365 385 aaPredicted RBP3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 ARRDC1Q8N5I2 433 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 Q8N7P7 452 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 ADAD2Q8NCV1 583 aaKnown RBP3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 LY6G5BQ8NDX9 201 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 DUSP18Q8NEJ0 188 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 OR2AK2Q8NG84 335 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 OR13D1Q8NGV5 346 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 OR10X1Q8NGY0 326 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 CT45A3Q8NHU0 189 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 ZFAND1Q8TCF1 268 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 CASTOR1Q8WTX7 329 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 LHX4Q969G2 390 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 MSI2Q96DH6 328 aaKnown RBP3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 RBMXL1Q96E39 390 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms