RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 TBPP20226 339 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 PSMB8P28062 276 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 RUNX1Q01196 453 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 CFHR3Q02985 330 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 KLF9Q13886 244 aaPredicted RBP11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 ZNF146Q15072 292 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 PRAMEF5Q5TYX0 476 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 C6orf201Q7Z4U5 140 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 MYOZ3Q8TDC0 251 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 NUDCD2Q8WVJ2 157 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 SNX22Q96L94 193 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 ZNF286AQ9HBT8 521 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 RCC2Q9P258 522 aaKnown RBP11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 KLK11Q9UBX7 282 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 UBE2J1Q9Y385 318 aaPredicted RBP11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 F8VVB4 439 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 F8VWA3 439 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 TOR1AO14656 332 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 AKAIN1P0CW23 69 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 ZNF44P15621 663 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 DTYMKP23919 212 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 OXA1LQ15070 435 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 ACTBL2Q562R1 376 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 SIGIRRQ6IA17 410 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 ACSM6Q6P461 480 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 HEPN1Q6WQI6 88 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 TMEM229BQ8NBD8 167 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 NEK7Q8TDX7 302 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 TOMM40LQ969M1 308 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 RPEQ96AT9 228 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 UBE2E2Q96LR5 201 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 CMSS1Q9BQ75 279 aaKnown RBP11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 CHST6Q9GZX3 395 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 C11orf54Q9H0W9 315 aaPredicted RBP11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 RETNQ9HD89 108 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 C12orf4Q9NQ89 552 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 KIAA1456Q9P272 454 aa11.35□□□□□ -0.59
HMGXB4-206ENST00000466438 TMEM82A0PJX8 343 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 DEGS1O15121 323 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 HSPA12AO43301 675 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 PSPNO60542 156 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 HAND1O96004 215 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 PRRX1P54821 245 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 GNB1P62873 340 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 HNF4GQ14541 408 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 MEF2DQ14814 521 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 CENPSQ8N2Z9 138 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 DLX4Q92988 240 aaPredicted RBP11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 FAM110AQ9BQ89 295 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 ST6GALNAC5Q9BVH7 336 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 GAL3ST2Q9H3Q3 398 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 RIMS4Q9H426 269 aaPredicted RBP11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 GNB4Q9HAV0 340 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 COPZ2Q9P299 210 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 AK3Q9UIJ7 227 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 KCNK7Q9Y2U2 307 aa11.34□□□□□ -0.59
HMGXB4-206ENST00000466438 FAM240BA0A1B0GVZ2 78 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 A0A1W2PPI3 338 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 MEIS3P1A6NDR6 274 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 ZNF736B4DX44 427 aaPredicted RBP11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 PLA2G10O15496 165 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 OR2H2O95918 312 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 OR8U9P0C7N5 309 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 KCNJ3P48549 501 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 TAS2R46P59540 309 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 GRK1Q15835 563 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 PAN3Q58A45 887 aaKnown RBP11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 TGIF2LXQ8IUE1 241 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 SUMF2Q8NBJ7 301 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 SULT4A1Q9BR01 284 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 FAAP24Q9BTP7 215 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 DPCDQ9BVM2 203 aaPredicted RBP11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 HIPK2Q9H2X6 1198 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 SEBOXQ9HB31 216 aaPredicted RBP11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 CHMP1AQ9HD42 196 aaPredicted RBP11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 LIN7CQ9NUP9 197 aaKnown RBP11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 IL36RNQ9UBH0 155 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 ELF5Q9UKW6 265 aaPredicted RBP11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 ANAPC10Q9UM13 185 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 VSIG4Q9Y279 399 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 TNCP24821 2201 aa11.33□□□□□ -0.6
HMGXB4-206ENST00000466438 UBE2QL1A1L167 161 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 SSX5O60225 188 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 IGKV1D-33P01593 117 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 IGKV1-33P01594 117 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 NAT1P18440 290 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 VDAC1P21796 283 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 DUSP1P28562 367 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 RNASE10Q5GAN6 216 aaKnown RBP11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 STEAP1BQ6NZ63 245 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 Q6P435 159 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 HOGA1Q86XE5 327 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 ARPC1AQ92747 370 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 OR51J1Q9H342 316 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 HRASLSQ9HDD0 168 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 MCUBQ9NWR8 336 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 ETAA1Q9NY74 926 aa11.32□□□□□ -0.6
HMGXB4-206ENST00000466438 A0A087X0M5 115 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 A0A1B0GX30 115 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 DISC1C4P0D8 188 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms