RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 C7orf50Q9BRJ6 194 aaKnown RBP1.28□□□□□ -2.2
SMC4-205ENST00000465563 PRO2289Q9P1D8 64 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 SNX12Q9UMY4 172 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 KLK5Q9Y337 293 aaPredicted RBP1.28□□□□□ -2.2
SMC4-205ENST00000465563 FAM215AQ9Y5M1 114 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 MYH11P35749 1972 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 REREQ9P2R6 1566 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 TEX50A0A1B0GTY4 177 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 M0R381 172 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 BIRC5O15392 142 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 IFI30P13284 250 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 CA7P43166 264 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 SERPINB10P48595 397 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 EMP2P54851 167 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 TAS2R45P59539 299 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 RPS24P62847 133 aaKnown RBP1.27□□□□□ -2.21
SMC4-205ENST00000465563 FABP5Q01469 135 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 PLEKHG7Q6ZR37 379 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 C1orf174Q8IYL3 243 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 OR2D3Q8NGH3 330 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 Q8WTZ3 238 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 PACRGQ96M98 296 aaPredicted RBP1.27□□□□□ -2.21
SMC4-205ENST00000465563 PECRQ9BY49 303 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 NSRP1Q9H0G5 558 aaKnown RBP1.27□□□□□ -2.21
SMC4-205ENST00000465563 GREB1Q4ZG55 1949 aa1.27□□□□□ -2.21
SMC4-205ENST00000465563 CPAMD8Q8IZJ3 1885 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 TRAV8-1A0A0A6YYK1 113 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 MDFIC2A0A1B0GVS7 189 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 GRIFINA4D1Z8 144 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 OR11H12B2RN74 326 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 F5H768 121 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 GNRH2O43555 120 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 PSMG1O95456 288 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 ZNF728P0DKX0 622 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 CD36P16671 472 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 CD200P41217 278 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 ZNF140P52738 457 aaPredicted RBP1.26□□□□□ -2.21
SMC4-205ENST00000465563 DMTNQ08495 405 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 EBPQ15125 230 aaKnown RBP1.26□□□□□ -2.21
SMC4-205ENST00000465563 TMEM156Q8N614 296 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 OR11H2Q8NH07 326 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 CLDND2Q8NHS1 167 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 LLPHQ9BRT6 129 aaKnown RBP1.26□□□□□ -2.21
SMC4-205ENST00000465563 DCUN1D5Q9BTE7 237 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 PLEKHJ1Q9NW61 149 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 EMC3Q9P0I2 261 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 HDGFL3Q9Y3E1 203 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 PCDH15Q96QU1 1955 aa1.26□□□□□ -2.21
SMC4-205ENST00000465563 TMEM235A6NFC5 223 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 C11orf86A6NJI1 115 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 FNDC10F2Z333 226 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 H3BRN7 92 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 UBFD1O14562 309 aaKnown RBP1.25□□□□□ -2.21
SMC4-205ENST00000465563 GSTZ1O43708 216 aaPredicted RBP1.25□□□□□ -2.21
SMC4-205ENST00000465563 STX10O60499 249 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 NDUFB2O95178 105 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 IGHV1-69P01742 117 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 HLA-DRAP01903 254 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 CD24P25063 80 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 IFNGR2P38484 337 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 XCL1P47992 114 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 RBM11P57052 281 aaKnown RBP1.25□□□□□ -2.21
SMC4-205ENST00000465563 TMEM251Q8N6I4 163 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 CNEP1R1Q8N9A8 125 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 CYGBQ8WWM9 190 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 MS4A6EQ96DS6 147 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 SLC2A9Q9NRM0 540 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 SPANXB1Q9NS25 103 aaPredicted RBP1.25□□□□□ -2.21
SMC4-205ENST00000465563 AMMECR1Q9Y4X0 333 aaPredicted RBP1.25□□□□□ -2.21
SMC4-205ENST00000465563 PCYT1BQ9Y5K3 369 aaPredicted RBP1.25□□□□□ -2.21
SMC4-205ENST00000465563 MED13Q9UHV7 2174 aa1.25□□□□□ -2.21
SMC4-205ENST00000465563 OR6C6A6NF89 314 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 GOLGA8KD6RF30 607 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 GOLGA8MH3BSY2 632 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 MT-CO2P00403 227 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 IL6P05231 212 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 UGT2B7P16662 529 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 CD40LGP29965 261 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 CXCR4P61073 352 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 MED21Q13503 144 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 GNA13Q14344 377 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 AMTNQ6UX39 209 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 SPATA12Q7Z6I5 190 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 LRRC34Q8IZ02 419 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 ZNF283Q8N7M2 679 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 SMCR5Q8TEV8 140 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 DERL2Q9GZP9 239 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 PSMD13Q9UNM6 376 aa1.24□□□□□ -2.21
SMC4-205ENST00000465563 ABCC12Q96J65 1359 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 RP1L1Q8IWN7 2480 aaPredicted RBP1.23□□□□□ -2.21
SMC4-205ENST00000465563 BAZ2BQ9UIF8 2168 aaKnown RBP1.23□□□□□ -2.21
SMC4-205ENST00000465563 TMED7-TICAM2A0A0A6YYA0 188 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 C1orf232A0A0U1RR37 186 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 YEATS4O95619 227 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 C8orf88P0DMB2 117 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 ALOX5APP20292 161 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 HLA-DRB3P79483 266 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 JOSD1Q15040 202 aaPredicted RBP1.23□□□□□ -2.21
SMC4-205ENST00000465563 TMEM31Q5JXX7 168 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 AGTRAPQ6RW13 159 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms