RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 NAA60Q9H7X0 242 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 DPM3Q9P2X0 92 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 A0A0A6YYJ9 748 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 C9orf170A2RU37 121 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 CT45A6P0DMU7 189 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 CT45A5P0DMU8 189 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 CT45A7P0DMV0 189 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 ZNF137PP52743 207 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 RAG2P55895 527 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 DHODHQ02127 395 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 DHRS2Q13268 280 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 SSX2Q16385 188 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 TPTE2P1Q5T6R2 138 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 LIN54Q6MZP7 749 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 IL17RELQ6ZVW7 336 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 TGIF2LXQ8IUE1 241 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 ZNF383Q8NA42 475 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 TMEM160Q9NX00 188 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 GAB2Q9UQC2 676 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 TLN2Q9Y4G6 2542 aa13.92□□□□□ -0.18
PTPRU-206ENST00000465525 IGHV3-72A0A0B4J1Y9 119 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 C3orf85A0A1B0GTC6 90 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 LEUTXA8MZ59 168 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 EPHA1P21709 976 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 F2RP25116 425 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 MSMO1Q15800 293 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 LYG2Q86SG7 212 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 CADM3Q8N126 398 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 NANPQ8TBE9 248 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 AJUBAQ96IF1 538 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 HSD17B10Q99714 261 aaKnown RBP13.91□□□□□ -0.18
PTPRU-206ENST00000465525 NEURL2Q9BR09 285 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 ALX4Q9H161 411 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-206ENST00000465525 SFT2D2O95562 160 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 FAM120AOSQ5T036 256 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 ZNF66Q6ZN08 573 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 MOB3BQ86TA1 216 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 GHITMQ9H3K2 345 aa13.91□□□□□ -0.18
PTPRU-206ENST00000465525 GSX1Q9H4S2 264 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-206ENST00000465525 RAMP3O60896 148 aa13.9□□□□□ -0.18
PTPRU-206ENST00000465525 IFNA2P01563 188 aa13.9□□□□□ -0.18
PTPRU-206ENST00000465525 GAPDHP04406 335 aaKnown RBP13.9□□□□□ -0.18
PTPRU-206ENST00000465525 IL5P05113 134 aa13.9□□□□□ -0.18
PTPRU-206ENST00000465525 CEACAM3P40198 252 aa13.9□□□□□ -0.18
PTPRU-206ENST00000465525 BRWD1-AS2P59051 145 aa13.9□□□□□ -0.18
PTPRU-206ENST00000465525 ANKRD55Q3KP44 614 aa13.9□□□□□ -0.18
PTPRU-206ENST00000465525 MIDNQ504T8 468 aa13.9□□□□□ -0.18
PTPRU-206ENST00000465525 UXS1Q8NBZ7 420 aa13.9□□□□□ -0.18
PTPRU-206ENST00000465525 ZNF431Q8TF32 576 aaPredicted RBP13.9□□□□□ -0.18
PTPRU-206ENST00000465525 NABP2Q9BQ15 211 aa13.9□□□□□ -0.18
PTPRU-206ENST00000465525 IGHV1-3A0A0C4DH29 117 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 A0A0U1RQK1 487 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 A0A1W2PPI3 338 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 RNF212BA8MTL3 300 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 PRAF2O60831 178 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 FCGR3BO75015 233 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 HNF1AP20823 631 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 THBS3P49746 956 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 BPIFB3P59826 476 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 ZNF816Q0VGE8 651 aaPredicted RBP13.89□□□□□ -0.19
PTPRU-206ENST00000465525 CATR1Q13166 79 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 MINOS1Q5TGZ0 78 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 C22orf15Q8WYQ4 148 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 DDB2Q92466 427 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 GPN1Q9HCN4 374 aaPredicted RBP13.89□□□□□ -0.19
PTPRU-206ENST00000465525 KCNIP3Q9Y2W7 256 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 TBL2Q9Y4P3 447 aaKnown RBP13.89□□□□□ -0.19
PTPRU-206ENST00000465525 MINOS1-NBL1R4GNA1 71 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 SVEP1Q4LDE5 3571 aa13.89□□□□□ -0.19
PTPRU-206ENST00000465525 H0Y980 276 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 FSHBP01225 129 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 TMEM187Q14656 261 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 FAM71F2Q6NXP2 309 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 SPAG16Q8N0X2 631 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 BCL6BQ8N143 479 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-206ENST00000465525 LHFPL5Q8TAF8 219 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 GLYATL2Q8WU03 294 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 CHAC2Q8WUX2 184 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 OR51J1Q9H342 316 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 LIN7CQ9NUP9 197 aaKnown RBP13.88□□□□□ -0.19
PTPRU-206ENST00000465525 F8P00451 2351 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 C7orf66A4D0T2 115 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 TIMM23O14925 209 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 CREBL2O60519 120 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-206ENST00000465525 RPA2P15927 270 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 CD24P25063 80 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 LPAR6P43657 344 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 ZNF585BQ52M93 769 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 TMEM222Q9H0R3 208 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 SLC35D1Q9NTN3 355 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 NUP50Q9UKX7 468 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 PRELID3BQ9Y3B1 194 aa13.88□□□□□ -0.19
PTPRU-206ENST00000465525 H0YJW9 148 aa13.87□□□□□ -0.19
PTPRU-206ENST00000465525 H7C2Y5 167 aa13.87□□□□□ -0.19
PTPRU-206ENST00000465525 Q71RC1 249 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-206ENST00000465525 MALSU1Q96EH3 234 aa13.87□□□□□ -0.19
PTPRU-206ENST00000465525 GALNT14Q96FL9 552 aa13.87□□□□□ -0.19
PTPRU-206ENST00000465525 ADTRPQ96IZ2 230 aa13.87□□□□□ -0.19
PTPRU-206ENST00000465525 MDFIC2A0A1B0GVS7 189 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 SSNA1O43805 119 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms