RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	MS4A6E	Q96DS6	147 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MRAP2	Q96G30	205 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	COQ2	Q96H96	371 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ITCH	Q96J02	903 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	CCDC115	Q96NT0	180 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	S1PR3	Q99500	378 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	NPAS2	Q99743	824 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	C20orf144	Q9BQM9	153 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ST6GALNAC5	Q9BVH7	336 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	NMNAT2	Q9BZQ4	307 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	DPY30	Q9C005	99 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	CST9L	Q9H4G1	147 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MOB1A	Q9H8S9	216 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ZDHHC11	Q9H8X9	412 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	JPT2	Q9H910	190 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ISYNA1	Q9NPH2	558 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	RBFOX1	Q9NWB1	397 aa	Known RBP	3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	TECR	Q9NZ01	308 aa	Known RBP	3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	THYN1	Q9P016	225 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	JPT1	Q9UK76	154 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	CES1P1	Q9UKY3	287 aa		3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	TSSC4	Q9Y5U2	329 aa	Predicted RBP	3.91	□□□□□ -1.78
CACNA1C-223	ENST00000465278	PRR14L	Q5THK1	2151 aa		3.9	□□□□□ -1.78
CACNA1C-223	ENST00000465278		A0A1W2PPR1	153 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	OR5H1	A6NKK0	313 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	HMSD	A8MTL9	139 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	ZNF724	A8MTY0	619 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	C4orf51	C9J302	202 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	PPP1R2P9	O14990	202 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	ADAP1	O75689	374 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	MPC2	O95563	127 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	MT-ND4	P03905	459 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	SERPINE2	P07093	398 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	CST2	P09228	141 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	CEL	P19835	753 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	KITLG	P21583	273 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	RBM34	P42696	430 aa	Known RBP	3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	PPT1	P50897	306 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	HCCS	P53701	268 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	ATP5J2	P56134	94 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	OR2B8P	P59922	312 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	RPS15A	P62244	130 aa	Known RBP	3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	SNRPD2	P62316	118 aa	Known RBP	3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	SELENOW	P63302	87 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	BAX	Q07812	192 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	RHEB	Q15382	184 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	NEDD8	Q15843	81 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	TIMM50	Q3ZCQ8	353 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	MUC21	Q5SSG8	566 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	C1orf194	Q5T5A4	169 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	TMEM244	Q5VVB8	128 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	SLC22A10	Q63ZE4	541 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	TOMM20L	Q6UXN7	152 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	TMPRSS11A	Q6ZMR5	421 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	ZNF841	Q6ZN19	808 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	TMPPE	Q6ZT21	453 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	COX15	Q7KZN9	410 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	COMMD6	Q7Z4G1	85 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	GKN2	Q86XP6	184 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	LYG1	Q8N1E2	194 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	SYS1	Q8N2H4	156 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	C10orf111	Q8N326	155 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	ZNF738	Q8NE65	137 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	BEST4	Q8NFU0	473 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	OR1B1	Q8NGR6	318 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	OR5W2	Q8NH69	310 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	OR1S1	Q8NH92	325 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	PATE1	Q8WXA2	126 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	POP5	Q969H6	163 aa	Known RBP	3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	TOMM40L	Q969M1	308 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	RAB40C	Q96S21	281 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	SPAG8	Q99932	426 aa	Predicted RBP	3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	NRIP2	Q9BQI9	281 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	C20orf24	Q9BUV8	137 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	ULBP2	Q9BZM5	246 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	OR8D2	Q9GZM6	311 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	C20orf85	Q9H1P6	137 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	IKZF5	Q9H5V7	419 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	SLC17A5	Q9NRA2	495 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	LYRM2	Q9NU23	88 aa	Predicted RBP	3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	NECAP2	Q9NVZ3	263 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	MRPL27	Q9P0M9	148 aa	Known RBP	3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	IKZF2	Q9UKS7	526 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	ARHGAP21	Q5T5U3	1957 aa		3.9	□□□□□ -1.79
CACNA1C-223	ENST00000465278	PPIAL4E	A0A075B759	164 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	MEIKIN	A0A087WXM9	373 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	PPIAL4C	A0A0B4J2A2	164 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278		A0A0J9YY10	115 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	TEX48	A0A1B0GUV7	120 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	EFCAB9	A8MZ26	197 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	FAM220BP	B1ANY3	271 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	PPIAL4D	F5H284	164 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278		H0Y980	276 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	GPR31	O00270	319 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	DLGAP1	O14490	977 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	RFXANK	O14593	260 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	CCL25	O15444	150 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	FABP7	O15540	132 aa		3.89	□□□□□ -1.79
CACNA1C-223	ENST00000465278	XRCC2	O43543	280 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms