RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TMEM208Q9BTX3 173 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 PATZ1Q9HBE1 687 aaKnown RBP10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 LIN7CQ9NUP9 197 aaKnown RBP10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 TRBV20OR9-2A0A075B6H5 130 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 S1PR2O95136 353 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 OR2H2O95918 312 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 TYMSP04818 313 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 KCNIP4Q6PIL6 250 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 TOMM20LQ6UXN7 152 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 MCEMP1Q8IX19 187 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 PXMP4Q9Y6I8 212 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 CEP192Q8TEP8 1941 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 F2Z2F3 143 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 COX5AP20674 150 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 CDKN1AP38936 164 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 EDDM3BP56851 147 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 BRWD1-AS2P59051 145 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 SPINK14Q6IE38 97 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 Q6ZWC4 215 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 KCNE4Q8WWG9 221 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 APOBEC3DQ96AK3 386 aaPredicted RBP10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 TMEM147Q9BVK8 224 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 STRADBQ9C0K7 418 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 TP53TG3Q9ULZ0 132 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 PAM16Q9Y3D7 125 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 PRR14LQ5THK1 2151 aa10.58□□□□□ -0.72
CLCNKA-204ENST00000464764 TMEM210A6NLX4 147 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 C17orf98A8MV24 154 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 LOC400499M0QZD8 3231 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 DNPH1O43598 174 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 WNT2P09544 360 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 CBLN1P23435 193 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 OTX2P32243 289 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 PPP1CBP62140 327 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 OR10P1Q8NGE3 313 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 WDYHV1Q96HA8 205 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 TRBV6-6A0A0A6YYG2 114 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 KIR2DL5BA0A0G2JN68 375 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 KIR2DL5BA0A0G2JPC4 375 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 MLNRO43193 412 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 KIR2DL5AQ8N109 375 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 OR52L2PQ8NGH6 319 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 RBM14Q96PK6 669 aaKnown RBP10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 OR2D2Q9H210 308 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 WDR54Q9H977 334 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 HSPB7Q9UBY9 170 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 TIMM9Q9Y5J7 89 aa10.57□□□□□ -0.72
CLCNKA-204ENST00000464764 LRRC30A6NM36 301 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 ANKRD30BLA7E2S9 258 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 IGFBP4P22692 258 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 CD82P27701 267 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 EPHA8P29322 1005 aaPredicted RBP10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 TFPI2P48307 235 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 LINC00310P59036 64 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 GNG3P63215 75 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 RAB30Q15771 203 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 NUFIP2Q7Z417 695 aaKnown RBP10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 WDR86Q86TI4 376 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 ZNF709Q8N972 641 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 DTD1Q8TEA8 209 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 POM121L2Q96KW2 1035 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 ELOVL5Q9NYP7 299 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 OR10J1P30954 320 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 OR3A1P47881 315 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 CDC34P49427 236 aaPredicted RBP10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 SOX8P57073 446 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 C3AR1Q16581 482 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 TMEM144Q7Z5S9 345 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 ZNF573Q86YE8 665 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 PLPPR2Q96GM1 343 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 DIRC2Q96SL1 478 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 PARD6GQ9BYG4 376 aaPredicted RBP10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 PARD6AQ9NPB6 346 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 PPIAL4AQ9Y536 164 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 SLC17A3O00476 420 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 CDIPTO14735 213 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 ZNF497Q6ZNH5 498 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 ZCCHC14Q8WYQ9 949 aaKnown RBP10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 HES7Q9BYE0 225 aa10.56□□□□□ -0.72
CLCNKA-204ENST00000464764 VENTXO95231 258 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 TGFBR3Q03167 851 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 Q8N7P7 452 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 OR2Y1Q8NGV0 311 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 CMTM2Q8TAZ6 248 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 ZDHHC11Q9H8X9 412 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 RNF114Q9Y508 228 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 LCN2P80188 198 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 HLA-DRB5Q30154 266 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 ALKBH6Q3KRA9 238 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 TPRX1Q8N7U7 411 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 VN1R17PQ8TDU5 208 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 SFRP2Q96HF1 295 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 HSPB9Q9BQS6 159 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 GOLT1BQ9Y3E0 138 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 RP1L1Q8IWN7 2480 aaPredicted RBP10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 ICE1Q9Y2F5 2266 aa10.55□□□□□ -0.72
CLCNKA-204ENST00000464764 IGHV3-43A0A0B4J1X8 118 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 DEFB108AA8MXU0 73 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 PSPNO60542 156 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 MT-CO3P00414 261 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms