RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 HIST1H1DP16402 221 aaKnown RBP15.9■□□□□ 0.14
PDLIM4-205ENST00000463615 RAB3BP20337 219 aa15.9■□□□□ 0.14
PDLIM4-205ENST00000463615 MYL9P24844 172 aa15.9■□□□□ 0.14
PDLIM4-205ENST00000463615 OR10A3P58181 314 aa15.9■□□□□ 0.14
PDLIM4-205ENST00000463615 TAGLNQ01995 201 aaKnown RBP15.9■□□□□ 0.14
PDLIM4-205ENST00000463615 ZNF429Q86V71 674 aa15.9■□□□□ 0.14
PDLIM4-205ENST00000463615 FLYWCH2Q96CP2 140 aaKnown RBP15.9■□□□□ 0.14
PDLIM4-205ENST00000463615 SLA2Q9H6Q3 261 aa15.9■□□□□ 0.14
PDLIM4-205ENST00000463615 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.9■□□□□ 0.14
PDLIM4-205ENST00000463615 ECI1P42126 302 aa15.89■□□□□ 0.13
PDLIM4-205ENST00000463615 LGALS7P47929 136 aa15.89■□□□□ 0.13
PDLIM4-205ENST00000463615 RPS16P62249 146 aaKnown RBP15.89■□□□□ 0.13
PDLIM4-205ENST00000463615 ACTBL2Q562R1 376 aa15.89■□□□□ 0.13
PDLIM4-205ENST00000463615 UBE2UQ5VVX9 321 aa15.89■□□□□ 0.13
PDLIM4-205ENST00000463615 OR5B12Q96R08 314 aa15.89■□□□□ 0.13
PDLIM4-205ENST00000463615 ZNF256Q9Y2P7 627 aaPredicted RBP15.89■□□□□ 0.13
PDLIM4-205ENST00000463615 TENM3Q9P273 2699 aa15.89■□□□□ 0.13
PDLIM4-205ENST00000463615 METTL21EPA6NDL7 271 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 LINC01619G3V211 115 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 M0R1X1 148 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 ARPC1BO15143 372 aaKnown RBP15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 CA2P00918 260 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 IGLV2-23P01705 113 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 CRYGBP07316 175 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 GSTT2P0CG29 244 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 GSTT2BP0CG30 244 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 FGF9P31371 208 aaPredicted RBP15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 LINC00205P59089 165 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 ARL6IP1Q15041 203 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 IGSF11Q5DX21 431 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 UNQ5815/PRO19632Q6UWF5 114 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 NR2C2APQ86WQ0 139 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 OR10J5Q8NHC4 309 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 DCUN1D4Q92564 292 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 RHOVQ96L33 236 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 PRR25Q96S07 402 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 SLC35D1Q9NTN3 355 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 SDHAF2Q9NX18 166 aa15.88■□□□□ 0.13
PDLIM4-205ENST00000463615 H3BUA1 57 aa15.87■□□□□ 0.13
PDLIM4-205ENST00000463615 OVOL1O14753 267 aa15.87■□□□□ 0.13
PDLIM4-205ENST00000463615 BRI3O95415 125 aa15.87■□□□□ 0.13
PDLIM4-205ENST00000463615 OR8U9P0C7N5 309 aa15.87■□□□□ 0.13
PDLIM4-205ENST00000463615 GNB3P16520 340 aa15.87■□□□□ 0.13
PDLIM4-205ENST00000463615 SSBP2P81877 361 aaPredicted RBP15.87■□□□□ 0.13
PDLIM4-205ENST00000463615 LFNGQ8NES3 379 aa15.87■□□□□ 0.13
PDLIM4-205ENST00000463615 ARPC1AQ92747 370 aa15.87■□□□□ 0.13
PDLIM4-205ENST00000463615 FAM103A1Q9BTL3 118 aaKnown RBP15.87■□□□□ 0.13
PDLIM4-205ENST00000463615 A3GALT2U3KPV4 340 aa15.87■□□□□ 0.13
PDLIM4-205ENST00000463615 SORL1Q92673 2214 aa15.87■□□□□ 0.13
PDLIM4-205ENST00000463615 BET1O15155 118 aa15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 CD40LGP29965 261 aa15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 TMEM177Q53S58 311 aa15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 C22orf42Q6IC83 251 aa15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 ABHD5Q8WTS1 349 aa15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 DLX4Q92988 240 aaPredicted RBP15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 C5orf30Q96GV9 206 aa15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 TMEM68Q96MH6 324 aa15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 WWC2-AS2Q96NR7 200 aa15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 CLCC1Q96S66 551 aa15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 YTHDF1Q9BYJ9 559 aaKnown RBP15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 ALX4Q9H161 411 aaPredicted RBP15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 OR2D2Q9H210 308 aa15.86■□□□□ 0.13
PDLIM4-205ENST00000463615 SLC25A17O43808 307 aa15.85■□□□□ 0.13
PDLIM4-205ENST00000463615 HSPB1P04792 205 aaKnown RBP15.85■□□□□ 0.13
PDLIM4-205ENST00000463615 SNRPBP14678 240 aaKnown RBP15.85■□□□□ 0.13
PDLIM4-205ENST00000463615 DTYMKP23919 212 aa15.85■□□□□ 0.13
PDLIM4-205ENST00000463615 FXYD3Q14802 87 aa15.85■□□□□ 0.13
PDLIM4-205ENST00000463615 H1FOOQ8IZA3 346 aaPredicted RBP15.85■□□□□ 0.13
PDLIM4-205ENST00000463615 SPARTQ8N0X7 666 aa15.85■□□□□ 0.13
PDLIM4-205ENST00000463615 IGHV4OR15-8A0A075B7B6 117 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 A0A087WW49 117 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 A0A0B4J203 849 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 NOTOA8MTQ0 251 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 RRASP10301 218 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 ACSM6Q6P461 480 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 TPRA1Q86W33 373 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 POC5Q8NA72 575 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 CASTOR1Q8WTX7 329 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 DDB2Q92466 427 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 FCGR1BQ92637 280 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 ADTRPQ96IZ2 230 aa15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 ZNF230Q9UIE0 474 aaPredicted RBP15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 KMT2CQ8NEZ4 4911 aaKnown RBP15.84■□□□□ 0.13
PDLIM4-205ENST00000463615 SLURP1P55000 103 aa15.83■□□□□ 0.12
PDLIM4-205ENST00000463615 TPPP2P59282 170 aa15.83■□□□□ 0.12
PDLIM4-205ENST00000463615 MAFIPQ8WZ33 124 aa15.83■□□□□ 0.12
PDLIM4-205ENST00000463615 TXNL4BQ9NX01 149 aaKnown RBP15.83■□□□□ 0.12
PDLIM4-205ENST00000463615 A0A075B6Q4 140 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 IGKV1D-8A0A087WSZ0 117 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 SCGNO76038 276 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 ATP6V1G2O95670 118 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 DUTP33316 252 aaKnown RBP15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 TALDO1P37837 337 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 CBX3Q13185 183 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 ARFRP1Q13795 201 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 RTL8BQ17RB0 113 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 MRGPRG-AS1Q2M3A8 158 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 HARBI1Q96MB7 349 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 MS4A10Q96PG2 267 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 GINS4Q9BRT9 223 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms