RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 FBXO24O75426 580 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 IGKV1-39P01597 117 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 GAPDHP04406 335 aaKnown RBP12.01□□□□□ -0.49
HDAC6-213ENST00000462730 IGKV1D-39P04432 117 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 S100PP25815 95 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 ZFP82Q8N141 532 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 CLEC18CQ8NCF0 446 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 GPR146Q96CH1 333 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 BBC3Q96PG8 261 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-213ENST00000462730 TMEM204Q9BSN7 226 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 NCOR1P1Q9H4R4 102 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 PPP1R14DQ9NXH3 145 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 CALYQ9NYX4 217 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 GNG12Q9UBI6 72 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 FBXL17Q9UF56 701 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 KPTNQ9Y664 436 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 DSCAMO60469 2012 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 COLCA2A8K830 154 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 C9JQL5 133 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 JTBO76095 146 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 PRB1P04280 392 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 DVL1P1P54792 670 aaPredicted RBP12□□□□□ -0.49
HDAC6-213ENST00000462730 MSMO1Q15800 293 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 ZNF585BQ52M93 769 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 BTNL3Q6UXE8 466 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 Q6ZRG5 221 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 C1orf87Q8N0U7 546 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 MUC15Q8N387 334 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 FAM234AQ9H0X4 552 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 MS4A5Q9H3V2 200 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 PLA2G2EQ9NZK7 142 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 JPT1Q9UK76 154 aa12□□□□□ -0.49
HDAC6-213ENST00000462730 F2RL2O00254 374 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 GPR137BO60478 399 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 P2RY1P47900 373 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 RELQ04864 619 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-213ENST00000462730 EIF4EBP1Q13541 118 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-213ENST00000462730 CXorf66Q5JRM2 361 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-213ENST00000462730 ABHD14BQ96IU4 210 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 MAGT1Q9H0U3 335 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 TRAV38-1A0A0B4J264 116 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 TMEM178BH3BS89 294 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 SSSCA1O60232 199 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 NXPH3O95157 252 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 TMEM33P57088 247 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 RPL30P62888 115 aaKnown RBP11.99□□□□□ -0.49
HDAC6-213ENST00000462730 CATR1Q13166 79 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 FGFRL1Q8N441 504 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 LYPD6BQ8NI32 183 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 EDARADDQ8WWZ3 215 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 CCL17Q92583 94 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 SMIM3Q9BZL3 60 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 TMEM106BQ9NUM4 274 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 METTL1Q9UBP6 276 aaKnown RBP11.99□□□□□ -0.49
HDAC6-213ENST00000462730 ARFGEF3Q5TH69 2177 aa11.99□□□□□ -0.49
HDAC6-213ENST00000462730 TANC2Q9HCD6 1990 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 TRGV10A0A0A0MS01 117 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 A0A1B0GU03 582 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 IGKV1-5P01602 117 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 MT-ND4LP03901 98 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 FABP1P07148 127 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 CGB3P0DN86 165 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 CGB7P0DN87 165 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 OMGP23515 440 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 IZUMO4Q1ZYL8 232 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 C17orf58Q2M2W7 97 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 MORN2Q502X0 79 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 OR2B11Q5JQS5 317 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 CLEC9AQ6UXN8 241 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 UBAC2Q8NBM4 344 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 TCTEX1D2Q8WW35 142 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 LSM10Q969L4 123 aaKnown RBP11.98□□□□□ -0.49
HDAC6-213ENST00000462730 BSCL2Q96G97 398 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-213ENST00000462730 OR51M1Q9H341 326 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 C11orf1Q9H5F2 150 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 RAB9BQ9NP90 201 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 CACFD1Q9UGQ2 172 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 SPTBN1Q01082 2364 aaKnown RBP11.98□□□□□ -0.49
HDAC6-213ENST00000462730 PPIAL4EA0A075B759 164 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 C5orf52A6NGY3 159 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 LINC00587B1AMM8 73 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 PPIAL4DF5H284 164 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 WRBO00258 174 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 TMPRSS2O15393 492 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 YPEL1O60688 119 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 PPIAL4FP0DN26 164 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 SLC25A6P12236 298 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 GPR12P47775 334 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 LOXL3P58215 753 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 GPR157Q5UAW9 335 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 TCF23Q7RTU1 214 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 YPEL2Q96QA6 119 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 PPIAL4AQ9Y536 164 aa11.98□□□□□ -0.49
HDAC6-213ENST00000462730 KBTBD11-OT1A0A1B0GTJ5 212 aa11.97□□□□□ -0.49
HDAC6-213ENST00000462730 C19orf84I3L1E1 186 aa11.97□□□□□ -0.49
HDAC6-213ENST00000462730 EIF3GO75821 320 aaKnown RBP eCLIP11.97□□□□□ -0.49
HDAC6-213ENST00000462730 CLDN1O95832 211 aa11.97□□□□□ -0.49
HDAC6-213ENST00000462730 IGHV3-7P01780 117 aa11.97□□□□□ -0.49
HDAC6-213ENST00000462730 NDUFB7P17568 137 aa11.97□□□□□ -0.49
HDAC6-213ENST00000462730 VAMP2P63027 116 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms