RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 ZNF729A6NN14 1252 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 MCRIP1C9JLW8 97 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 CLPXO76031 633 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 GABARAPO95166 117 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 NAPSAO96009 420 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 GLAP06280 429 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 MYOD1P15172 320 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 RCC1P18754 421 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 COX7A1P24310 79 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 BLVRBP30043 206 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 SAA4P35542 130 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 GLP1RP43220 463 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 VEGFCP49767 419 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 BPIFB3P59826 476 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 VBP1P61758 197 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 KRTAP21-3Q3LHN1 58 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 KRTAP24-1Q3LI83 254 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 NCR3LG1Q68D85 454 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 FAM122CQ6P4D5 195 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 ZNF880Q6PDB4 577 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 TRAPPC6BQ86SZ2 158 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 OR11H6Q8NGC7 330 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 OR4K15Q8NH41 348 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 RFESDQ8TAC1 157 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 UBALD1Q8TB05 177 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 TAF15Q92804 592 aaKnown RBP eCLIP6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 SLC25A38Q96DW6 304 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 ARHGAP5-AS1Q96IT6 56 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 DUX5Q96PT3 197 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 SUCNR1Q9BXA5 334 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 PECRQ9BY49 303 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 TMEM133Q9H2Q1 129 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 ZNF286AQ9HBT8 521 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 SPACA1Q9HBV2 294 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 VCX3AQ9NNX9 186 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 CALYQ9NYX4 217 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 AK3Q9UIJ7 227 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 ELF5Q9UKW6 265 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 RAB22AQ9UL26 194 aa6.42□□□□□ -1.38
ECHDC1-212ENST00000461239 FUOMA2VDF0 154 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 C12orf77C9JDV5 145 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 TCF21O43680 179 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 IGLV1-47P01700 117 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 IGHV3-7P01780 117 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 MELTFP08582 738 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 CD34P28906 385 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 PNRC1Q12796 327 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 DYNC1I2Q13409 638 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 SLC9A3R2Q15599 337 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 TIMM50Q3ZCQ8 353 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 GPR107Q5VW38 600 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 ZNF565Q8N9K5 539 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 OR4P4Q8NGL7 312 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 OR1L1Q8NH94 360 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 LGALS14Q8TCE9 139 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 PIFOQ8TCI5 191 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 LEAP2Q969E1 77 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 PTX4Q96A99 478 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 TSC22D3Q99576 134 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 HEXA-AS1Q9H8Q6 139 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 IDI2-AS1Q9NZ38 188 aa6.41□□□□□ -1.38
ECHDC1-212ENST00000461239 STAB1Q9NY15 2570 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 TRBV6-6A0A0A6YYG2 114 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 SMIM31A0A1B0GVY4 71 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 A0A1W2PPQ1 181 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 A0A1W2PRV1 198 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 MEIOCA2RUB1 952 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 LY6LH3BQJ8 138 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 MFNGO00587 321 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 ORC5O43913 435 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 IGHV4-59P01825 116 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 ARG1P05089 322 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 GNB3P16520 340 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 GZMHP20718 246 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 IER3P46695 156 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 UBA52P62987 128 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 RBM39Q14498 530 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 HMGN3Q15651 99 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 LTC4SQ16873 150 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 IDNKQ5T6J7 187 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 ABHD12Q8N2K0 398 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 OR13D1Q8NGV5 346 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 OR10R2Q8NGX6 335 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 NDNFQ8TB73 568 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 NEK7Q8TDX7 302 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 ZNF418Q8TF45 676 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 ARL11Q969Q4 196 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 SLC25A46Q96AG3 418 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 NEDD4LQ96PU5 975 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 URM1Q9BTM9 101 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 GAL3ST2Q9H3Q3 398 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 PLEKHJ1Q9NW61 149 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 PSG11Q9UQ72 335 aa6.4□□□□□ -1.38
ECHDC1-212ENST00000461239 IGHV3-43A0A0B4J1X8 118 aa6.39□□□□□ -1.39
ECHDC1-212ENST00000461239 A0A1W2PPE3 182 aa6.39□□□□□ -1.39
ECHDC1-212ENST00000461239 CLDN34H7C241 214 aa6.39□□□□□ -1.39
ECHDC1-212ENST00000461239 SLC31A2O15432 143 aa6.39□□□□□ -1.39
ECHDC1-212ENST00000461239 CA11O75493 328 aa6.39□□□□□ -1.39
ECHDC1-212ENST00000461239 HBZP02008 142 aa6.39□□□□□ -1.39
ECHDC1-212ENST00000461239 IGHV3-43DP0DP04 118 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms