RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 WSB1Q9Y6I7 421 aa17.63■□□□□ 0.41
TRAF4-207ENST00000461195 SPDEFO95238 335 aa17.62■□□□□ 0.41
TRAF4-207ENST00000461195 THBS3P49746 956 aa17.62■□□□□ 0.41
TRAF4-207ENST00000461195 TAGLNQ01995 201 aaKnown RBP17.62■□□□□ 0.41
TRAF4-207ENST00000461195 PSG5Q15238 335 aa17.62■□□□□ 0.41
TRAF4-207ENST00000461195 KPRPQ5T749 579 aaPredicted RBP17.62■□□□□ 0.41
TRAF4-207ENST00000461195 LCNL1Q6ZST4 164 aa17.62■□□□□ 0.41
TRAF4-207ENST00000461195 C8orf86Q6ZUL3 223 aa17.62■□□□□ 0.41
TRAF4-207ENST00000461195 ZNF695Q8IW36 515 aa17.62■□□□□ 0.41
TRAF4-207ENST00000461195 C5orf30Q96GV9 206 aa17.62■□□□□ 0.41
TRAF4-207ENST00000461195 AUNIPQ9H7T9 357 aa17.62■□□□□ 0.41
TRAF4-207ENST00000461195 METTL1Q9UBP6 276 aaKnown RBP17.62■□□□□ 0.41
TRAF4-207ENST00000461195 TRAV41A0A0B4J266 112 aa17.61■□□□□ 0.41
TRAF4-207ENST00000461195 G3V318 75 aa17.61■□□□□ 0.41
TRAF4-207ENST00000461195 SMIM18P0DKX4 95 aa17.61■□□□□ 0.41
TRAF4-207ENST00000461195 NFYAP23511 347 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-207ENST00000461195 NCS1P62166 190 aa17.61■□□□□ 0.41
TRAF4-207ENST00000461195 CX3CL1P78423 397 aa17.61■□□□□ 0.41
TRAF4-207ENST00000461195 CBX3Q13185 183 aa17.61■□□□□ 0.41
TRAF4-207ENST00000461195 UBE2NLQ5JXB2 153 aa17.61■□□□□ 0.41
TRAF4-207ENST00000461195 ETV3LQ6ZN32 361 aa17.61■□□□□ 0.41
TRAF4-207ENST00000461195 SLC25A46Q96AG3 418 aa17.61■□□□□ 0.41
TRAF4-207ENST00000461195 S100A16Q96FQ6 103 aaKnown RBP17.61■□□□□ 0.41
TRAF4-207ENST00000461195 ADTRPQ96IZ2 230 aa17.61■□□□□ 0.41
TRAF4-207ENST00000461195 OR2W1Q9Y3N9 320 aa17.61■□□□□ 0.41
TRAF4-207ENST00000461195 FCN1O00602 326 aa17.6■□□□□ 0.41
TRAF4-207ENST00000461195 XRCC3O43542 346 aa17.6■□□□□ 0.41
TRAF4-207ENST00000461195 PSMB8P28062 276 aa17.6■□□□□ 0.41
TRAF4-207ENST00000461195 PPIFP30405 207 aaKnown RBP17.6■□□□□ 0.41
TRAF4-207ENST00000461195 CDX1P47902 265 aaPredicted RBP17.6■□□□□ 0.41
TRAF4-207ENST00000461195 LUMP51884 338 aaPredicted RBP17.6■□□□□ 0.41
TRAF4-207ENST00000461195 NDPQ00604 133 aa17.6■□□□□ 0.41
TRAF4-207ENST00000461195 BEST4Q8NFU0 473 aa17.6■□□□□ 0.41
TRAF4-207ENST00000461195 KCTD12Q96CX2 325 aaKnown RBP17.6■□□□□ 0.41
TRAF4-207ENST00000461195 NOTCH3Q9UM47 2321 aa17.6■□□□□ 0.41
TRAF4-207ENST00000461195 J3QRK9 145 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 HLA-DQB1P01920 261 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 RRASP10301 218 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 IGLL1P15814 213 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 MYCNOSP40205 109 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 LGALS7P47929 136 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 CRIP2P52943 208 aaPredicted RBP17.59■□□□□ 0.41
TRAF4-207ENST00000461195 ARPC4P59998 168 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 VBP1P61758 197 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 RTL8BQ17RB0 113 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 HOGA1Q86XE5 327 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 ZNF645Q8N7E2 425 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 GVQW1Q8N7I0 195 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 SAMD12Q8N8I0 201 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 LINC00482Q8N8I6 264 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 BVESQ8NE79 360 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 CLCC1Q96S66 551 aa17.59■□□□□ 0.41
TRAF4-207ENST00000461195 SLC25A17O43808 307 aa17.58■□□□□ 0.4
TRAF4-207ENST00000461195 SLC22A5O76082 557 aa17.58■□□□□ 0.4
TRAF4-207ENST00000461195 DUTP33316 252 aaKnown RBP17.58■□□□□ 0.4
TRAF4-207ENST00000461195 CBX5P45973 191 aa17.58■□□□□ 0.4
TRAF4-207ENST00000461195 TMEM65Q6PI78 240 aa17.58■□□□□ 0.4
TRAF4-207ENST00000461195 ZNF562Q6V9R5 426 aa17.58■□□□□ 0.4
TRAF4-207ENST00000461195 MRPL41Q8IXM3 137 aaKnown RBP17.58■□□□□ 0.4
TRAF4-207ENST00000461195 ABHD5Q8WTS1 349 aa17.58■□□□□ 0.4
TRAF4-207ENST00000461195 RCC1LQ96I51 464 aaKnown RBP17.58■□□□□ 0.4
TRAF4-207ENST00000461195 FBXO7Q9Y3I1 522 aa17.58■□□□□ 0.4
TRAF4-207ENST00000461195 CA2P00918 260 aa17.57■□□□□ 0.4
TRAF4-207ENST00000461195 IGLV1-40P01703 118 aa17.57■□□□□ 0.4
TRAF4-207ENST00000461195 PTHLHP12272 177 aa17.57■□□□□ 0.4
TRAF4-207ENST00000461195 ECSCRQ19T08 205 aa17.57■□□□□ 0.4
TRAF4-207ENST00000461195 TMEM177Q53S58 311 aa17.57■□□□□ 0.4
TRAF4-207ENST00000461195 MINDY2Q8NBR6 621 aa17.57■□□□□ 0.4
TRAF4-207ENST00000461195 DDB2Q92466 427 aa17.57■□□□□ 0.4
TRAF4-207ENST00000461195 HARBI1Q96MB7 349 aa17.57■□□□□ 0.4
TRAF4-207ENST00000461195 SHOXO15266 292 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 TUSC2O75896 110 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 DUS4LO95620 317 aaKnown RBP17.56■□□□□ 0.4
TRAF4-207ENST00000461195 IGLV2-23P01705 113 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 EGR2P11161 476 aaPredicted RBP17.56■□□□□ 0.4
TRAF4-207ENST00000461195 TMEM267Q0VDI3 215 aaPredicted RBP17.56■□□□□ 0.4
TRAF4-207ENST00000461195 C19orf54Q5BKX5 351 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 TMEM69Q5SWH9 247 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 PPP1R27Q86WC6 154 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 ANKRD13BQ86YJ7 626 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 TCTEX1D1Q8N7M0 179 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 MYOZ3Q8TDC0 251 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 RAX2Q96IS3 184 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 P2RX4Q99571 388 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 MRPS26Q9BYN8 205 aaKnown RBP17.56■□□□□ 0.4
TRAF4-207ENST00000461195 KLK15Q9H2R5 256 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 TPSG1Q9NRR2 321 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 NUBP2Q9Y5Y2 271 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 A3GALT2U3KPV4 340 aa17.56■□□□□ 0.4
TRAF4-207ENST00000461195 IGKV1D-13A0A0B4J2D9 117 aa17.55■□□□□ 0.4
TRAF4-207ENST00000461195 A0A1W2PN81 502 aa17.55■□□□□ 0.4
TRAF4-207ENST00000461195 LINC00473A8K010 186 aa17.55■□□□□ 0.4
TRAF4-207ENST00000461195 CCL24O00175 119 aa17.55■□□□□ 0.4
TRAF4-207ENST00000461195 IGKV1-13P0DP09 117 aa17.55■□□□□ 0.4
TRAF4-207ENST00000461195 CHRNA7P36544 502 aa17.55■□□□□ 0.4
TRAF4-207ENST00000461195 C4orf3Q8WVX3 66 aa17.55■□□□□ 0.4
TRAF4-207ENST00000461195 DUX3Q96PT4 197 aa17.55■□□□□ 0.4
TRAF4-207ENST00000461195 NECAP2Q9NVZ3 263 aa17.55■□□□□ 0.4
TRAF4-207ENST00000461195 FOXA2Q9Y261 457 aaPredicted RBP17.55■□□□□ 0.4
TRAF4-207ENST00000461195 RBMX2Q9Y388 322 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms