RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 RAB27BO00194 218 aa13.27□□□□□ -0.29
TOP3A-202ENST00000461127 SOCS1O15524 211 aa13.27□□□□□ -0.29
TOP3A-202ENST00000461127 PPIFP30405 207 aaKnown RBP13.27□□□□□ -0.29
TOP3A-202ENST00000461127 ETV6P41212 452 aa13.27□□□□□ -0.29
TOP3A-202ENST00000461127 TAS2R20P59543 309 aa13.27□□□□□ -0.29
TOP3A-202ENST00000461127 ZNF45Q02386 682 aa13.27□□□□□ -0.29
TOP3A-202ENST00000461127 ZNF846Q147U1 533 aa13.27□□□□□ -0.29
TOP3A-202ENST00000461127 ARL6IP1Q15041 203 aa13.27□□□□□ -0.29
TOP3A-202ENST00000461127 MOGAT2Q3SYC2 334 aa13.27□□□□□ -0.29
TOP3A-202ENST00000461127 DDB2Q92466 427 aa13.27□□□□□ -0.29
TOP3A-202ENST00000461127 ELOVL1Q9BW60 279 aa13.27□□□□□ -0.29
TOP3A-202ENST00000461127 WDR12Q9GZL7 423 aaKnown RBP13.27□□□□□ -0.29
TOP3A-202ENST00000461127 AKIP1Q9NQ31 210 aa13.27□□□□□ -0.29
TOP3A-202ENST00000461127 TXNL1O43396 289 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 PDCD6O75340 191 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 IGLV1-40P01703 118 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 FUT3P21217 361 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 PTBP1P26599 531 aaKnown RBP eCLIP13.26□□□□□ -0.29
TOP3A-202ENST00000461127 SSTR5P35346 364 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 F2RL1P55085 397 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 CDNFQ49AH0 187 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 PYDC2Q56P42 97 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 PYHIN1Q6K0P9 492 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 MFSD4AQ8N468 514 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 NEK7Q8TDX7 302 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 RTN4IP1Q8WWV3 396 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-202ENST00000461127 ALX4Q9H161 411 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-202ENST00000461127 TUBA4BQ9H853 241 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 PLEKHJ1Q9NW61 149 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 V9GYH0 126 aa13.26□□□□□ -0.29
TOP3A-202ENST00000461127 G3V318 75 aa13.25□□□□□ -0.29
TOP3A-202ENST00000461127 TPPPO94811 219 aa13.25□□□□□ -0.29
TOP3A-202ENST00000461127 HIST1H1DP16402 221 aaKnown RBP13.25□□□□□ -0.29
TOP3A-202ENST00000461127 SNX29P2Q8IUI4 249 aa13.25□□□□□ -0.29
TOP3A-202ENST00000461127 ARHGAP5-AS1Q96IT6 56 aa13.25□□□□□ -0.29
TOP3A-202ENST00000461127 PECRQ9BY49 303 aa13.25□□□□□ -0.29
TOP3A-202ENST00000461127 TOLLIPQ9H0E2 274 aa13.25□□□□□ -0.29
TOP3A-202ENST00000461127 AUNIPQ9H7T9 357 aa13.25□□□□□ -0.29
TOP3A-202ENST00000461127 TRAV41A0A0B4J266 112 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 FOXI3A8MTJ6 420 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-202ENST00000461127 MCRIP1C9JLW8 97 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 GSTP1P09211 210 aaKnown RBP13.24□□□□□ -0.29
TOP3A-202ENST00000461127 GNB3P16520 340 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 KCNJ3P48549 501 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 MRPS15P82914 257 aaKnown RBP13.24□□□□□ -0.29
TOP3A-202ENST00000461127 PLAC9Q5JTB6 97 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 SIGIRRQ6IA17 410 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 C6orf201Q7Z4U5 140 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 LINC00311Q8N616 119 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 SUMF2Q8NBJ7 301 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 FLYWCH2Q96CP2 140 aaKnown RBP13.24□□□□□ -0.29
TOP3A-202ENST00000461127 RSRP1Q9BUV0 290 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 IFT22Q9H7X7 185 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 PARP11Q9NR21 331 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 ZNF581Q9P0T4 197 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 RCC2Q9P258 522 aaKnown RBP13.24□□□□□ -0.29
TOP3A-202ENST00000461127 HSF4Q9ULV5 492 aa13.24□□□□□ -0.29
TOP3A-202ENST00000461127 FRAS1Q86XX4 4008 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 IGHV4OR15-8A0A075B7B6 117 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 A0A087WW49 117 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 TMEM235A6NFC5 223 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 ZNF736B4DX44 427 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-202ENST00000461127 ATP6V0E1O15342 81 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 HLA-DQB1P01920 261 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 LGALS1P09382 135 aaKnown RBP13.23□□□□□ -0.29
TOP3A-202ENST00000461127 GZMHP20718 246 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 PRSS3P35030 304 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 TMEM50BP56557 158 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 GNG2P59768 71 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 PAX5Q02548 391 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 ARFRP1Q13795 201 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 MMDQ15546 238 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 RSBN1Q5VWQ0 802 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-202ENST00000461127 C8orf31Q8N9H6 132 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 OR52M1Q8NGK5 317 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 LINC00476Q8WZB0 136 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 SOSTQ9BQB4 213 aa13.23□□□□□ -0.29
TOP3A-202ENST00000461127 DPCDQ9BVM2 203 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-202ENST00000461127 PLECQ15149 4684 aaKnown RBP13.23□□□□□ -0.29
TOP3A-202ENST00000461127 TRAV24A0A0B4J272 114 aa13.22□□□□□ -0.29
TOP3A-202ENST00000461127 UBE2QL1A1L167 161 aa13.22□□□□□ -0.29
TOP3A-202ENST00000461127 SDCBPO00560 298 aaPredicted RBP13.22□□□□□ -0.29
TOP3A-202ENST00000461127 MFNGO00587 321 aa13.22□□□□□ -0.29
TOP3A-202ENST00000461127 ARPC1BO15143 372 aaKnown RBP13.22□□□□□ -0.29
TOP3A-202ENST00000461127 IGLV1-51P01701 117 aa13.22□□□□□ -0.29
TOP3A-202ENST00000461127 GLAP06280 429 aa13.22□□□□□ -0.29
TOP3A-202ENST00000461127 CD3GP09693 182 aa13.22□□□□□ -0.29
TOP3A-202ENST00000461127 MRPS10P82664 201 aaKnown RBP13.22□□□□□ -0.29
TOP3A-202ENST00000461127 RNASE12Q5GAN4 147 aaKnown RBP13.22□□□□□ -0.29
TOP3A-202ENST00000461127 HAPLN4Q86UW8 402 aa13.22□□□□□ -0.29
TOP3A-202ENST00000461127 GDPD1Q8N9F7 314 aa13.22□□□□□ -0.29
TOP3A-202ENST00000461127 ABHD1Q96SE0 405 aa13.22□□□□□ -0.29
TOP3A-202ENST00000461127 SULT4A1Q9BR01 284 aa13.22□□□□□ -0.29
TOP3A-202ENST00000461127 FAAP24Q9BTP7 215 aa13.22□□□□□ -0.29
TOP3A-202ENST00000461127 TRAV39A0A0B4J263 110 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 C12orf77C9JDV5 145 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 LY6G6CO95867 125 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 HLA-DRB1P01911 266 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 HSPB1P04792 205 aaKnown RBP13.21□□□□□ -0.29
TOP3A-202ENST00000461127 PTHLHP12272 177 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms