RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 A0A1W2PPB8 328 aa9.87□□□□□ -0.83
CPSF3-202ENST00000460593 A0A1W2PRS3 328 aa9.87□□□□□ -0.83
CPSF3-202ENST00000460593 KIR3DP1A8MWS1 328 aa9.87□□□□□ -0.83
CPSF3-202ENST00000460593 LMO7DNF2Z398 122 aa9.87□□□□□ -0.83
CPSF3-202ENST00000460593 F6UZH7 168 aa9.87□□□□□ -0.83
CPSF3-202ENST00000460593 CXCL13O43927 109 aa9.87□□□□□ -0.83
CPSF3-202ENST00000460593 CDC34P49427 236 aaPredicted RBP9.87□□□□□ -0.83
CPSF3-202ENST00000460593 FOXG1P55316 489 aaPredicted RBP9.87□□□□□ -0.83
CPSF3-202ENST00000460593 TMEM14EPQ6UXP3 125 aa9.87□□□□□ -0.83
CPSF3-202ENST00000460593 AAED1Q7RTV5 226 aa9.87□□□□□ -0.83
CPSF3-202ENST00000460593 C17orf82Q86X59 251 aaPredicted RBP9.87□□□□□ -0.83
CPSF3-202ENST00000460593 MED12LQ86YW9 2145 aa9.87□□□□□ -0.83
CPSF3-202ENST00000460593 OCC1Q8TAD7 63 aa9.87□□□□□ -0.83
CPSF3-202ENST00000460593 DOCK10Q96BY6 2186 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 FCN1O00602 326 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 SCRG1O75711 98 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 TRIM61Q5EBN2 209 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 TXN2Q99757 166 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 C5orf49A4QMS7 147 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 DIRC3C9JPN6 131 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 COX5AP20674 150 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 PSG7Q13046 419 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 Q6ZN92 141 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 SAXO1Q8IYX7 474 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 FAM19A2Q8N3H0 131 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 OR5A2Q8NGI9 324 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 ABHD3Q8WU67 409 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 RCHY1Q96PM5 261 aa9.86□□□□□ -0.83
CPSF3-202ENST00000460593 A0A1W2PR77 199 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 C20orf202A1L168 122 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 CBR3O75828 277 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 CLDN14O95500 239 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 SLC25A6P12236 298 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 S100A7P31151 101 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 CLDN15P56746 228 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 VASH2Q86V25 355 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 MKXQ8IYA7 352 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 DRAM1Q8N682 238 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 IFI44Q8TCB0 444 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 LRFN3Q9BTN0 628 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 SNURFLB1AK76 121 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 TFF1P04155 84 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 UBE2NP61088 152 aaKnown RBP9.85□□□□□ -0.83
CPSF3-202ENST00000460593 RPL30P62888 115 aaKnown RBP9.85□□□□□ -0.83
CPSF3-202ENST00000460593 Q8N976 141 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 PRRG4Q9BZD6 226 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 PROK2Q9HC23 129 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 CLEC1BQ9P126 229 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 RNF24Q9Y225 148 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 IGHV1OR15-9A0A0B4J2B8 117 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 ZNF503-AS2A6NEH8 195 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 C10orf142B7Z368 130 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 VENTXO95231 258 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 TDGF1P13385 188 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 CA6P23280 308 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 TCL1AP56279 114 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 LCN12Q6JVE5 192 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 FBXO46Q6PJ61 603 aaPredicted RBP9.85□□□□□ -0.83
CPSF3-202ENST00000460593 Q6ZS49 121 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 APOBEC3DQ96AK3 386 aaPredicted RBP9.85□□□□□ -0.83
CPSF3-202ENST00000460593 TMEM147Q9BVK8 224 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 CHRNA10Q9GZZ6 450 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 GNB4Q9HAV0 340 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 DLL3Q9NYJ7 618 aa9.85□□□□□ -0.83
CPSF3-202ENST00000460593 TBL2Q9Y4P3 447 aaKnown RBP9.85□□□□□ -0.83
CPSF3-202ENST00000460593 KNTC1P50748 2209 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 ODAMA1E959 279 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 RRHO14718 337 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 OR10P1Q8NGE3 313 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 LSM10Q969L4 123 aaKnown RBP9.84□□□□□ -0.83
CPSF3-202ENST00000460593 PLPPR2Q96GM1 343 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 K7EN84 100 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 DKK1O94907 266 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 S1PR2O95136 353 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 LIFP15018 202 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 CEBPDP49716 269 aaPredicted RBP9.84□□□□□ -0.83
CPSF3-202ENST00000460593 ACSF3Q4G176 576 aaPredicted RBP9.84□□□□□ -0.83
CPSF3-202ENST00000460593 SPATA46Q5T0L3 261 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 ALKBH2Q6NS38 261 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 SIGLECL1Q8N7X8 197 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 OR10G8Q8NGN5 311 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 STARD4Q96DR4 205 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 UHRF2Q96PU4 802 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 TRAPPC2LQ9UL33 140 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 WIPI2Q9Y4P8 454 aa9.84□□□□□ -0.83
CPSF3-202ENST00000460593 PMS2P5A8MQ11 134 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 HYPMO75409 117 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 PIAS2O75928 621 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 CRYABP02511 175 aaKnown RBP9.83□□□□□ -0.84
CPSF3-202ENST00000460593 CTXN2P0C2S0 81 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 ARL14EPLP0DKL9 152 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 AMTP48728 403 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 FOXL1Q12952 345 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 MRPL21Q7Z2W9 205 aaKnown RBP9.83□□□□□ -0.84
CPSF3-202ENST00000460593 SLC25A45Q8N413 288 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 ST6GALNAC3Q8NDV1 305 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 APH1AQ96BI3 265 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 VAMP5O95183 116 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 TIMP3P35625 211 aa9.83□□□□□ -0.84
CPSF3-202ENST00000460593 HNRNPA3P51991 378 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms