RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 OR4S2Q8NH73 311 aa8.9□□□□□ -0.98
SMNDC1-203ENST00000460483 TCTEX1D2Q8WW35 142 aa8.9□□□□□ -0.98
SMNDC1-203ENST00000460483 FLYWCH2Q96CP2 140 aaKnown RBP8.9□□□□□ -0.98
SMNDC1-203ENST00000460483 TSNAXQ99598 290 aaKnown RBP8.9□□□□□ -0.98
SMNDC1-203ENST00000460483 RSRP1Q9BUV0 290 aa8.9□□□□□ -0.98
SMNDC1-203ENST00000460483 KIAA1456Q9P272 454 aa8.9□□□□□ -0.98
SMNDC1-203ENST00000460483 FLNAP21333 2647 aaKnown RBP8.9□□□□□ -0.98
SMNDC1-203ENST00000460483 HIVEP2P31629 2446 aa8.9□□□□□ -0.99
SMNDC1-203ENST00000460483 TEX13DA0A0J9YY54 714 aaPredicted RBP8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 LINC00854A0A1B0GVQ3 168 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 TIMM23O14925 209 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 RBFOX2O43251 390 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 MOSP00540 346 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 HRASP01112 189 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 SERPINE2P07093 398 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 RPA2P15927 270 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 GNRHRP30968 328 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 IER3P46695 156 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 REG1BP48304 166 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 HILS1P60008 231 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 UBE2MP61081 183 aaKnown RBP8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 RND3P61587 244 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 SRPXP78539 464 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 ODF3L1Q8IXM7 274 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 SIGLECL1Q8N7X8 197 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 OR4D10Q8NGI6 311 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 VSTM2AQ8TAG5 236 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 OSR1Q8TAX0 266 aaPredicted RBP8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 ZFAND2BQ8WV99 257 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 AJUBAQ96IF1 538 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 CYYR1Q96J86 154 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 SDHCQ99643 169 aaPredicted RBP8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 NABP2Q9BQ15 211 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 ZNF251Q9BRH9 671 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 CCL28Q9NRJ3 127 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 SLC2A9Q9NRM0 540 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 SLC35D1Q9NTN3 355 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 VPREB3Q9UKI3 123 aa8.89□□□□□ -0.99
SMNDC1-203ENST00000460483 IGKV1D-13A0A0B4J2D9 117 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 A0A1W2PPI3 338 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 H3BUX3 64 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 MPPED1O15442 326 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 PGLYRP1O75594 196 aaPredicted RBP8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 NDUFB6O95139 128 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 SPDEFO95238 335 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 RLN1P04808 185 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 ZNF735P0CB33 412 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 CT45A6P0DMU7 189 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 CT45A5P0DMU8 189 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 CT45A7P0DMV0 189 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 IGKV1-13P0DP09 117 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 TMEM11P17152 192 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 DUTP33316 252 aaKnown RBP8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 PIGPP57054 158 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 ERVK-16P61578 105 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 DHODHQ02127 395 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 RPL39P5Q59GN2 51 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 TMEM128Q5BJH2 165 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 ZNF818PQ6ZRF7 136 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 C5orf24Q7Z6I8 188 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 BCL6BQ8N143 479 aaPredicted RBP8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 CENPSQ8N2Z9 138 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 OR13C8Q8NGS7 320 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 MARCH1Q8TCQ1 289 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 MRPL20Q9BYC9 149 aaKnown RBP8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 PARP12Q9H0J9 701 aaKnown RBP8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 CACFD1Q9UGQ2 172 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 GPR132Q9UNW8 380 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 TCF19Q9Y242 345 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 VPS13CQ709C8 3753 aa8.88□□□□□ -0.99
SMNDC1-203ENST00000460483 FAM90A9PA6NNJ1 464 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 H0YJW9 148 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 SHOXO15266 292 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 HOXA3O43365 443 aaPredicted RBP8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 HPRT1P00492 218 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 IGKV1D-33P01593 117 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 IGKV1-33P01594 117 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 F2RP25116 425 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 RAB25P57735 213 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 RPS16P62249 146 aaKnown RBP8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 EBI3Q14213 229 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 VMA21Q3ZAQ7 101 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 PHLDA2Q53GA4 152 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 FAAP20Q6NZ36 180 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 PLET1Q6UQ28 207 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 SPAG16Q8N0X2 631 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 NPFFR1Q9GZQ6 430 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 FXYD6Q9H0Q3 95 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 PLEKHA2Q9HB19 425 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 NUBP2Q9Y5Y2 271 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.87□□□□□ -0.998e-7■■■■□ 23.4
SMNDC1-203ENST00000460483 CR1P17927 2039 aa8.87□□□□□ -0.99
SMNDC1-203ENST00000460483 C3orf85A0A1B0GTC6 90 aa8.86□□□□□ -0.99
SMNDC1-203ENST00000460483 NCBP2LA6PVI3 153 aaKnown RBP8.86□□□□□ -0.99
SMNDC1-203ENST00000460483 FGF16O43320 207 aa8.86□□□□□ -0.99
SMNDC1-203ENST00000460483 FCGR3BO75015 233 aa8.86□□□□□ -0.99
SMNDC1-203ENST00000460483 ACTL6BO94805 426 aa8.86□□□□□ -0.99
SMNDC1-203ENST00000460483 OR2F2O95006 317 aa8.86□□□□□ -0.99
SMNDC1-203ENST00000460483 VENTXO95231 258 aa8.86□□□□□ -0.99
SMNDC1-203ENST00000460483 PTTG1O95997 202 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms