RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CLDN1O95832 211 aa13.06□□□□□ -0.32
LMNB1-203ENST00000460265 SPRY4Q9C004 299 aa13.06□□□□□ -0.32
LMNB1-203ENST00000460265 PROCRQ9UNN8 238 aa13.06□□□□□ -0.32
LMNB1-203ENST00000460265 ADAMTS20P59510 1910 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 B4DEV8 164 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 K7N7A8 449 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 HPRT1P00492 218 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 OPN1MWP04001 364 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 OPN1MW2P0DN77 364 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 OPN1MW3P0DN78 364 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 PTTG1IPP53801 180 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 EWSR1Q01844 656 aaKnown RBP eCLIP13.05□□□□□ -0.324e-8■■■□□ 17.2
LMNB1-203ENST00000460265 FOXF2Q12947 444 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 PLA2G2CQ5R387 149 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 C1orf194Q5T5A4 169 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 GPR157Q5UAW9 335 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 MDS2Q8NDY4 140 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 FGF23Q9GZV9 251 aaPredicted RBP13.05□□□□□ -0.32
LMNB1-203ENST00000460265 GNG13Q9P2W3 67 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 ZFP92A6NM28 416 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 PSG7Q13046 419 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 RNASE8Q8TDE3 154 aaKnown RBP13.05□□□□□ -0.32
LMNB1-203ENST00000460265 PLEKHF2Q9H8W4 249 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 OR2W1Q9Y3N9 320 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 ANKRD11Q6UB99 2663 aaPredicted RBP13.05□□□□□ -0.32
LMNB1-203ENST00000460265 KLF14Q8TD94 323 aaPredicted RBP13.05□□□□□ -0.32
LMNB1-203ENST00000460265 TBX15Q96SF7 602 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 HINT2Q9BX68 163 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 TAAR3PQ9P1P4 343 aa13.05□□□□□ -0.32
LMNB1-203ENST00000460265 A0A1B0GW64 132 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 CBY3A6NI87 242 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 SPRY3O43610 288 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 VDAC1P21796 283 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 ATP6V0CP27449 155 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 MPV17P39210 176 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 DYNLT3P51808 116 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 ZNF266Q14584 549 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 ICAM4Q14773 271 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 ZNF718Q3SXZ3 478 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 SPSB4Q96A44 273 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 MSI2Q96DH6 328 aaKnown RBP13.04□□□□□ -0.32
LMNB1-203ENST00000460265 RCC1LQ96I51 464 aaKnown RBP13.04□□□□□ -0.32
LMNB1-203ENST00000460265 ARV1Q9H2C2 271 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 ANAPC10Q9UM13 185 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 TRAV24A0A0B4J272 114 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 TMEM210A6NLX4 147 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 PGLYRP1O75594 196 aaPredicted RBP13.04□□□□□ -0.32
LMNB1-203ENST00000460265 HSPB1P04792 205 aaKnown RBP13.04□□□□□ -0.32
LMNB1-203ENST00000460265 BMP5P22003 454 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 CST9LP1Q5W188 147 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 CEACAM18A8MTB9 384 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 IFNL4K9M1U5 179 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 AQP7O14520 342 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 CYB5R3P00387 301 aaPredicted RBP13.04□□□□□ -0.32
LMNB1-203ENST00000460265 LCN15Q6UWW0 184 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 NAGKQ9UJ70 344 aa13.04□□□□□ -0.32
LMNB1-203ENST00000460265 HMGB3O15347 200 aaKnown RBP13.03□□□□□ -0.32
LMNB1-203ENST00000460265 TMEM11P17152 192 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 CCKARP32238 428 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 ADIRFQ15847 76 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 COLCA1Q6ZS62 124 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 C9orf106Q8NAJ2 232 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 SDSLQ96GA7 329 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 OR5B12Q96R08 314 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 IL36GQ9NZH8 169 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 A0A1W2PPQ1 181 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 F2RP25116 425 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 BRS3P32247 399 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 IL13RA2Q14627 380 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 GALMQ96C23 342 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 OR2D2Q9H210 308 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 FUT9Q9Y231 359 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 POLR3KQ9Y2Y1 108 aaPredicted RBP13.03□□□□□ -0.32
LMNB1-203ENST00000460265 HAND1O96004 215 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 WT1P19544 449 aaPredicted RBP13.03□□□□□ -0.32
LMNB1-203ENST00000460265 SELENOHQ8IZQ5 122 aaKnown RBP13.03□□□□□ -0.32
LMNB1-203ENST00000460265 TMEM252Q8N6L7 170 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 MS4A10Q96PG2 267 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 SRD5A3Q9H8P0 318 aa13.03□□□□□ -0.32
LMNB1-203ENST00000460265 WNK2Q9Y3S1 2297 aa13.02□□□□□ -0.32
LMNB1-203ENST00000460265 SPTBN4Q9H254 2564 aa13.02□□□□□ -0.32
LMNB1-203ENST00000460265 TRBV24-1A0A075B6N3 115 aa13.02□□□□□ -0.32
LMNB1-203ENST00000460265 SMPD2O60906 423 aa13.02□□□□□ -0.32
LMNB1-203ENST00000460265 OR10J1P30954 320 aa13.02□□□□□ -0.32
LMNB1-203ENST00000460265 NRN1LQ496H8 165 aa13.02□□□□□ -0.32
LMNB1-203ENST00000460265 FAM53AQ6NSI3 398 aaPredicted RBP13.02□□□□□ -0.32
LMNB1-203ENST00000460265 SPSB3Q6PJ21 355 aa13.02□□□□□ -0.32
LMNB1-203ENST00000460265 TOMM20LQ6UXN7 152 aa13.02□□□□□ -0.32
LMNB1-203ENST00000460265 OR52L2PQ8NGH6 319 aa13.02□□□□□ -0.32
LMNB1-203ENST00000460265 OR1L1Q8NH94 360 aa13.02□□□□□ -0.32
LMNB1-203ENST00000460265 TUBG2Q9NRH3 451 aa13.02□□□□□ -0.32
LMNB1-203ENST00000460265 NCOR2Q9Y618 2525 aa13.02□□□□□ -0.33
LMNB1-203ENST00000460265 ARHGAP21Q5T5U3 1957 aa13.02□□□□□ -0.33
LMNB1-203ENST00000460265 CEACAM1P13688 526 aa13.02□□□□□ -0.33
LMNB1-203ENST00000460265 MAJINQ3KP22 176 aa13.02□□□□□ -0.33
LMNB1-203ENST00000460265 PLPPR1Q8TBJ4 325 aa13.02□□□□□ -0.33
LMNB1-203ENST00000460265 MRPL30Q8TCC3 161 aaKnown RBP13.02□□□□□ -0.33
LMNB1-203ENST00000460265 IL22RA2Q969J5 263 aa13.02□□□□□ -0.33
LMNB1-203ENST00000460265 ZNF71Q9NQZ8 489 aaPredicted RBP13.02□□□□□ -0.33
LMNB1-203ENST00000460265 IGHV3OR15-7A0A075B7D8 119 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms