RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 KIAA1456Q9P272 454 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 WASF3Q9UPY6 502 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 A0A1B0GUS0 222 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 IGSF23A1L1A6 192 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 NTN3O00634 580 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-207ENST00000458046 SSSCA1O60232 199 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 MMP7P09237 267 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-207ENST00000458046 NKX2-1P43699 371 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-207ENST00000458046 HMGN3Q15651 99 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 SPINK14Q6IE38 97 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 RBMS3Q6XE24 437 aaKnown RBP9.97□□□□□ -0.81
SYNE2-207ENST00000458046 ZNF818PQ6ZRF7 136 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 PPP1R32Q7Z5V6 425 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 GAPTQ8N292 157 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 PFDN5Q99471 154 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 TMEM222Q9H0R3 208 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 KCNJ16Q9NPI9 418 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 ZNF391Q9UJN7 358 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 A0A087X0K7 114 aa9.96□□□□□ -0.81
SYNE2-207ENST00000458046 TRDCB7Z8K6 153 aa9.96□□□□□ -0.81
SYNE2-207ENST00000458046 NPIPB11E5RHQ5 1161 aa9.96□□□□□ -0.81
SYNE2-207ENST00000458046 HSD17B6O14756 317 aa9.96□□□□□ -0.81
SYNE2-207ENST00000458046 TNFSF12O43508 249 aa9.96□□□□□ -0.81
SYNE2-207ENST00000458046 CST7O76096 145 aa9.96□□□□□ -0.81
SYNE2-207ENST00000458046 HLA-HP01893 362 aa9.96□□□□□ -0.81
SYNE2-207ENST00000458046 FOXG1P55316 489 aaPredicted RBP9.96□□□□□ -0.81
SYNE2-207ENST00000458046 TMEM217Q8N7C4 229 aa9.96□□□□□ -0.81
SYNE2-207ENST00000458046 OR2G3Q8NGZ4 309 aa9.96□□□□□ -0.81
SYNE2-207ENST00000458046 FGF23Q9GZV9 251 aaPredicted RBP9.96□□□□□ -0.81
SYNE2-207ENST00000458046 NCKAP5O14513 1909 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 IGKV1D-13A0A0B4J2D9 117 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 C5orf49A4QMS7 147 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 MBD3L5A6NJ08 208 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-207ENST00000458046 ZNF724A8MTY0 619 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 RPL36A-HNRNPH2H7BZ11 118 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 RAMP3O60896 148 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 MRPL33O75394 65 aaKnown RBP9.96□□□□□ -0.82
SYNE2-207ENST00000458046 CEACAM4O75871 244 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 IGKV1-13P0DP09 117 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 FOLR2P14207 255 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 ATP6V0CP27449 155 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 RANP62826 216 aaKnown RBP9.96□□□□□ -0.82
SYNE2-207ENST00000458046 UTF1Q5T230 341 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 ADAM5Q6NVV9 412 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 NECAP1Q8NC96 275 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 OR10W1Q8NGF6 305 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 TMEM171Q8WVE6 324 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 TMEM56Q96MV1 263 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 SLC35B3Q9H1N7 401 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 TMEM56-RWDD3S4R434 201 aa9.96□□□□□ -0.82
SYNE2-207ENST00000458046 TGOLN2O43493 480 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 MT-ND4LP03901 98 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 IFNA4P05014 189 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 PRDX4Q13162 271 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 BTNL3Q6UXE8 466 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 SLC16A13Q7RTY0 426 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 TGIF2LXQ8IUE1 241 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 CCL28Q9NRJ3 127 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 OTOGLQ3ZCN5 2332 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 K7N7A8 449 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 ZNF14P17017 642 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-207ENST00000458046 CYB561P49447 251 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 SULT1A1P50225 295 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 RAB5CP51148 216 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 OR2B8PP59922 312 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 GAGE1Q13065 139 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 OR5C1Q8NGR4 320 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 OR52E5Q8NH55 327 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 PBDC1Q9BVG4 233 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 PRRG4Q9BZD6 226 aa9.95□□□□□ -0.82
SYNE2-207ENST00000458046 TMEM50AO95807 157 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 HERPUD1Q15011 391 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 TMEM252Q8N6L7 170 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 ZNF488Q96MN9 340 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 Q9N2K0 584 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 R4GN57 208 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 FREM1Q5H8C1 2179 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 TMEM213A2RRL7 107 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 ZNF503-AS2A6NEH8 195 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 SLC22A20A6NK97 555 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 ZNF732B4DXR9 585 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 TM4SF5O14894 197 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 CDS2O95674 445 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 NGFP01138 241 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 SSBP2P81877 361 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-207ENST00000458046 TMEM144Q7Z5S9 345 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-207ENST00000458046 PLEKHF2Q9H8W4 249 aa9.94□□□□□ -0.82
SYNE2-207ENST00000458046 ANKRD17O75179 2603 aaKnown RBP9.94□□□□□ -0.82
SYNE2-207ENST00000458046 TMPRSS2O15393 492 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 RAB5AP20339 215 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 LMO1P25800 156 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 PAX6P26367 422 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 DYNLT3P51808 116 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 RUNX1Q01196 453 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 FABP9Q0Z7S8 132 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 HAGHQ16775 308 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 RNF212Q495C1 297 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 SOHLH1Q5JUK2 328 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 PLA2G2CQ5R387 149 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms