RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 C3orf85A0A1B0GTC6 90 aa11.52□□□□□ -0.56
TOP3B-213ENST00000457179 ZNF320A2RRD8 509 aa11.52□□□□□ -0.56
TOP3B-213ENST00000457179 RRP8O43159 456 aaKnown RBP11.52□□□□□ -0.56
TOP3B-213ENST00000457179 GNRHRP30968 328 aa11.52□□□□□ -0.56
TOP3B-213ENST00000457179 OTX1P32242 354 aaPredicted RBP11.52□□□□□ -0.56
TOP3B-213ENST00000457179 NPBWR2P48146 333 aa11.52□□□□□ -0.56
TOP3B-213ENST00000457179 CPT1CQ8TCG5 803 aa11.52□□□□□ -0.56
TOP3B-213ENST00000457179 PYGO2Q9BRQ0 406 aa11.52□□□□□ -0.56
TOP3B-213ENST00000457179 FOXI3A8MTJ6 420 aaPredicted RBP11.52□□□□□ -0.57
TOP3B-213ENST00000457179 ZNF737O75373 536 aa11.52□□□□□ -0.57
TOP3B-213ENST00000457179 IGLV3-1P01715 115 aa11.52□□□□□ -0.57
TOP3B-213ENST00000457179 AADACP22760 399 aa11.52□□□□□ -0.57
TOP3B-213ENST00000457179 CTSSP25774 331 aa11.52□□□□□ -0.57
TOP3B-213ENST00000457179 ZNF709Q8N972 641 aa11.52□□□□□ -0.57
TOP3B-213ENST00000457179 CMTM2Q8TAZ6 248 aa11.52□□□□□ -0.57
TOP3B-213ENST00000457179 SCGB1C1Q8TD33 95 aa11.52□□□□□ -0.57
TOP3B-213ENST00000457179 SLC35E1Q96K37 410 aa11.52□□□□□ -0.57
TOP3B-213ENST00000457179 GAL3ST2Q9H3Q3 398 aa11.52□□□□□ -0.57
TOP3B-213ENST00000457179 SPRR3Q9UBC9 169 aa11.52□□□□□ -0.57
TOP3B-213ENST00000457179 SH3BGRL2Q9UJC5 107 aa11.52□□□□□ -0.57
TOP3B-213ENST00000457179 SLC22A20A6NK97 555 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 KLK10O43240 276 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 TNFSF13O75888 250 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 CRYGSP22914 178 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 TCF23Q7RTU1 214 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 LRTM2Q8N967 370 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 OR56B2PQ8NGI1 322 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 MANBALQ9NQG1 85 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 TRDCB7Z8K6 153 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 TCF15Q12870 199 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 Q6ZWC4 215 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 STPG4Q8N801 248 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 HSPB9Q9BQS6 159 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 CRIM1Q9NZV1 1036 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 RNF24Q9Y225 148 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 OR5G3P0C626 314 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 CYP2G1PQ6ZSU1 146 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 CCDC71LQ8N9Z2 235 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 C11orf1Q9H5F2 150 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 TMEM106BQ9NUM4 274 aa11.51□□□□□ -0.57
TOP3B-213ENST00000457179 BMP5P22003 454 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 GPM6AP51674 278 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 IZUMO4Q1ZYL8 232 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 OR4F5Q8NH21 305 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 LHX4Q969G2 390 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 OR4F4Q96R69 305 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 PARLQ9H300 379 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 DECR2Q9NUI1 292 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 IL36RNQ9UBH0 155 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 MED13LQ71F56 2210 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 MPPED1O15442 326 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 CDS2O95674 445 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 IL3RAP26951 378 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 CNN3Q15417 329 aaKnown RBP11.5□□□□□ -0.57
TOP3B-213ENST00000457179 MRPL21Q7Z2W9 205 aaKnown RBP11.5□□□□□ -0.57
TOP3B-213ENST00000457179 TMEM178AQ8NBL3 297 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 PLPPR1Q8TBJ4 325 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 GATAD1Q8WUU5 269 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 HS3ST6Q96QI5 342 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 C20orf144Q9BQM9 153 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 FAM103A1Q9BTL3 118 aaKnown RBP11.5□□□□□ -0.57
TOP3B-213ENST00000457179 TM2D1Q9BX74 207 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 FZR1Q9UM11 496 aa11.5□□□□□ -0.57
TOP3B-213ENST00000457179 IFNA1P01562 189 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 HOXA4Q00056 320 aaPredicted RBP11.49□□□□□ -0.57
TOP3B-213ENST00000457179 VHLLQ6RSH7 139 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 MRGPRGQ86SM5 289 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 ZNF488Q96MN9 340 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 SPIN2AQ99865 258 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 SPIN2BQ9BPZ2 258 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 KBTBD11O94819 623 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 MEF2BQ02080 365 aaPredicted RBP11.49□□□□□ -0.57
TOP3B-213ENST00000457179 PLP2Q04941 152 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 TPTE2P1Q5T6R2 138 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 TBC1D26Q86UD7 250 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 OSR2Q8N2R0 312 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 CISD2Q8N5K1 135 aaKnown RBP11.49□□□□□ -0.57
TOP3B-213ENST00000457179 TECTBQ96PL2 329 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 TRAV1-1A0A0B4J248 108 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 GYPAP02724 150 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 CELA3BP08861 270 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 ZNF611Q8N823 705 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 UBALD1Q8TB05 177 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 MRPL30Q8TCC3 161 aaKnown RBP11.49□□□□□ -0.57
TOP3B-213ENST00000457179 SPSB1Q96BD6 273 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 TXN2Q99757 166 aa11.49□□□□□ -0.57
TOP3B-213ENST00000457179 ALKBH7Q9BT30 221 aaPredicted RBP11.49□□□□□ -0.57
TOP3B-213ENST00000457179 ITGB1BP1O14713 200 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 NDUFB8O95169 186 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 IAPPP10997 89 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 ZNF133P52736 654 aaPredicted RBP11.48□□□□□ -0.57
TOP3B-213ENST00000457179 PCBD1P61457 104 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 KCNIP4Q6PIL6 250 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 FOXL2NBQ6ZUU3 175 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 ERASQ7Z444 233 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 P2RX4Q99571 388 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 VPS25Q9BRG1 176 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 SAMD10Q9BYL1 202 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 TMEM222Q9H0R3 208 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 OR6C6A6NF89 314 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms