RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 CCL20P78556 96 aa4.31□□□□□ -1.72
PCDH9-203ENST00000456367 HYAL1Q12794 435 aa4.31□□□□□ -1.72
PCDH9-203ENST00000456367 HES1Q14469 280 aa4.31□□□□□ -1.72
PCDH9-203ENST00000456367 TCF24Q7RTU0 167 aa4.31□□□□□ -1.72
PCDH9-203ENST00000456367 C9orf40Q8IXQ3 194 aa4.31□□□□□ -1.72
PCDH9-203ENST00000456367 TMEM178AQ8NBL3 297 aa4.31□□□□□ -1.72
PCDH9-203ENST00000456367 RPEQ96AT9 228 aa4.31□□□□□ -1.72
PCDH9-203ENST00000456367 NEU1Q99519 415 aa4.31□□□□□ -1.72
PCDH9-203ENST00000456367 GFI1Q99684 422 aa4.31□□□□□ -1.72
PCDH9-203ENST00000456367 CITED1Q99966 193 aa4.31□□□□□ -1.72
PCDH9-203ENST00000456367 TWSG1Q9GZX9 223 aa4.31□□□□□ -1.72
PCDH9-203ENST00000456367 CEACAM18A8MTB9 384 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 GNG7O60262 68 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 TYMSP04818 313 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 SMIM10L1P0DMW3 83 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 TDGF1P13385 188 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 ACP1P24666 158 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 SRD5A2P31213 254 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 METAP1P53582 386 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 RPL31P62899 125 aaKnown RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 CEACAM21Q3KPI0 293 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 CENPWQ5EE01 88 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 PRSS41Q7RTY9 318 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 ATP5L2Q7Z4Y8 100 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 TEX29Q8N6K0 151 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 OR1L8Q8NGR8 309 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 TMEM186Q96B77 213 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 SMIM10Q96HG1 83 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 SPANXDQ9BXN6 97 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 NPCDR1Q9BY65 106 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 OR2H1Q9GZK4 316 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 CXXC4Q9H2H0 198 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 MAP1LC3AQ9H492 121 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 COL16A1Q07092 1604 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 CDK5RAP2Q96SN8 1893 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 IGKV1D-42A0A075B6H8 117 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 A0A1W2PP11 408 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 LDLRAD4O15165 306 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 SYNGR1O43759 233 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 OR2J3O76001 311 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 IGKV1D-16P01601 117 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 CXCL10P02778 98 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 KIR2DL1P43626 348 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 KIR2DL2P43627 348 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 CKS1BP61024 79 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 Q0VG73 95 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 SRSF7Q16629 238 aaKnown RBP eCLIP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 TMEM30BQ3MIR4 351 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 KIAA1644Q3SXP7 199 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 ZNF658BQ4V348 819 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 YRDCQ86U90 279 aaKnown RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 ATOH7Q8N100 152 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 DEFB119Q8N690 84 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 CNEP1R1Q8N9A8 125 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 OR1K1Q8NGR3 316 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 ZNF414Q96IQ9 312 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 ALKBH3Q96Q83 286 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 ANAPC13Q9BS18 74 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 R3HDMLQ9H3Y0 253 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 STRCP1A6NGW2 1772 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 KIAA1217Q5T5P2 1943 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 QSER1Q2KHR3 1735 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 IGHV3-20A0A0C4DH32 117 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 LOC107984156A0A0G2JMH3 177 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 H3BUT2 72 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 CA6P23280 308 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 TSPOP30536 169 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 MEF2CQ06413 473 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 LRRC10Q5BKY1 277 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 AMMECR1LQ6DCA0 310 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 FAM166AQ6J272 317 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 ARL17AQ8IVW1 177 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 SNRNP40Q96DI7 357 aaKnown RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 FER1L6-AS2Q96M78 137 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 CST9LQ9H4G1 147 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 IL36RNQ9UBH0 155 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 RABAC1Q9UI14 185 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 KLF13Q9Y2Y9 288 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 AMMECR1Q9Y4X0 333 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 SPTY2D1-AS1A0A0U1RR47 76 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 CA1P00915 261 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 C1QTNF9P0C862 333 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 SELLP14151 372 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 RPL7P18124 248 aaKnown RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 S100A4P26447 101 aaKnown RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 PPP1CAP62136 330 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 DEFB103AP81534 67 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 MRPS11P82912 194 aaKnown RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 TBR1Q16650 682 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 DMRTC1Q5HYR2 192 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 ASPHD2Q6ICH7 369 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 ANKRD33Q7Z3H0 272 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 ZNF385AQ96PM9 386 aaKnown RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 UCN2Q96RP3 112 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 CRISPLD2Q9H0B8 497 aa4.3□□□□□ -1.72
PCDH9-203ENST00000456367 SLC25A10Q9UBX3 287 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-203ENST00000456367 RBFOX2O43251 390 aaKnown RBP eCLIP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 ATP5LO75964 103 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 SLC35B1P78383 322 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 COA6Q5JTJ3 125 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms